| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148661380
Identifier: 148661380
GI number: 148661380
Start: 1788102
End: 1788617
Strand: Reverse
Name: 148661380
Synonym: MRA_1596
Alternate gene names: NA
Gene position: 1788617-1788102 (Counterclockwise)
Preceding gene: 148661381
Following gene: 148661379
Centisome position: 40.47
GC content: 65.89
Gene sequence:
>516_bases ATGAGCCGGCACCACAACATCGTGATCGTCTGTGACCACGGCCGCAAAGGCGATGGCCGCATCGAACACGAGCGCTGCGA TCTTGTCGCGCCGATCATTTGGGTCGACGAGACCCAGGGCTGGTTACCGCAGGCGCCAGCGGTGGCAACATTACTCGACG ACGACAACCAGCCGCGAGCCGTTATTGGCTTGCCGCCCAACGAGTCTCGCCTACGACCTGAAATGCGCCGCGACGGGTGG GTGCGGCTGCACTGGGAATTCGCCTGCCTGAGGTACGGCGCCGCCGGCGTGCGCACGTGCGAGCAGCGGCCCGTGCGGGT TCGCAACGGCGACCTGCAAACACTGTGCGAGAACGTTCCGCGGCTACTGACCGGACTGGCCGGCAACCCCGACTACGCAC CGGGTTTTGCGGTGCAGTCGGACGCGGTGGTCGTCGCCATGTGGCTGTGGCGCACGCTCTGCGAAAGCGACACGCCGAAC AAACTACGCGCCACCCCAACGCGTGGTAGCTGCTAG
Upstream 100 bases:
>100_bases GGTTCCGCGCCGTCCTCGACGTCCTCGCTGAAGTCGTTGTCCAGCCGGTCGGCAAGAGCGGCAGGATATTCAATCCCGAA CGGGTGCAGGTGAATTGGCG
Downstream 100 bases:
>100_bases ACTCCGACGTAGCCGGCTTCGACTCCGGGGTTTTGGTGTCCCCAAGGAGTCGCACGTGTCGACCATCTACCATCATCGCG GCCGCGTAGCCGCACTGTCT
Product: putative phiRv1 prophage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSRHHNIVIVCDHGRKGDGRIEHERCDLVAPIIWVDETQGWLPQAPAVATLLDDDNQPRAVIGLPPNESRLRPEMRRDGW VRLHWEFACLRYGAAGVRTCEQRPVRVRNGDLQTLCENVPRLLTGLAGNPDYAPGFAVQSDAVVVAMWLWRTLCESDTPN KLRATPTRGSC
Sequences:
>Translated_171_residues MSRHHNIVIVCDHGRKGDGRIEHERCDLVAPIIWVDETQGWLPQAPAVATLLDDDNQPRAVIGLPPNESRLRPEMRRDGW VRLHWEFACLRYGAAGVRTCEQRPVRVRNGDLQTLCENVPRLLTGLAGNPDYAPGFAVQSDAVVVAMWLWRTLCESDTPN KLRATPTRGSC >Mature_170_residues SRHHNIVIVCDHGRKGDGRIEHERCDLVAPIIWVDETQGWLPQAPAVATLLDDDNQPRAVIGLPPNESRLRPEMRRDGWV RLHWEFACLRYGAAGVRTCEQRPVRVRNGDLQTLCENVPRLLTGLAGNPDYAPGFAVQSDAVVVAMWLWRTLCESDTPNK LRATPTRGSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19213; Mature: 19082
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHHNIVIVCDHGRKGDGRIEHERCDLVAPIIWVDETQGWLPQAPAVATLLDDDNQPRA CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCE VIGLPPNESRLRPEMRRDGWVRLHWEFACLRYGAAGVRTCEQRPVRVRNGDLQTLCENVP EEECCCCCHHCCCHHCCCCEEEEEEEEEEEHHCCCHHHHHCCCCEEEECCCHHHHHHHHH RLLTGLAGNPDYAPGFAVQSDAVVVAMWLWRTLCESDTPNKLRATPTRGSC HHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCC >Mature Secondary Structure SRHHNIVIVCDHGRKGDGRIEHERCDLVAPIIWVDETQGWLPQAPAVATLLDDDNQPRA CCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCE VIGLPPNESRLRPEMRRDGWVRLHWEFACLRYGAAGVRTCEQRPVRVRNGDLQTLCENVP EEECCCCCHHCCCHHCCCCEEEEEEEEEEEHHCCCHHHHHCCCCEEEECCCHHHHHHHHH RLLTGLAGNPDYAPGFAVQSDAVVVAMWLWRTLCESDTPNKLRATPTRGSC HHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA