| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is ppe19
Identifier: 148661151
GI number: 148661151
Start: 1533753
End: 1534943
Strand: Reverse
Name: ppe19
Synonym: MRA_1370
Alternate gene names: 148661151
Gene position: 1534943-1533753 (Counterclockwise)
Preceding gene: 148661152
Following gene: 148661149
Centisome position: 34.73
GC content: 67.93
Gene sequence:
>1191_bases GTGGTGGACTTCGGGGCGTTACCACCGGAGATCAACTCCGCGAGGATGTACGCCGGCCCGGGTTCGGCCTCGCTGGTGGC CGCCGCGAAGATGTGGGACAGCGTGGCGAGTGACCTGTTTTCGGCCGCGTCGGCGTTTCAGTCGGTGGTCTGGGGTCTGA CGACGGGATCGTGGATAGGTTCGTCGGCGGGTCTGATGGTGGCGGCGGCCTCGCCGTATGTGGCGTGGATGAGCGTCACC GCGGGGCAGGCCGAGCTGACCGCCGCCCAGGTCCGGGTTGCTGCGGCGGCCTACGAGACGGCGTATGGGCTGACGGTGCC CCCGCCGGTGATCGCCGAGAACCGTGCTGAACTGATGATTCTGATAGCGACCAACCTCTTGGGGCAAAACACCCCGGCGA TCGCGGTCAACGAGGCCGAATACGGGGAGATGTGGGCCCAAGACGCCGCCGCGATGTTTGGCTACGCCGCCACGGCGGCG ACGGCGACCGAGGCGTTGCTGCCGTTCGAGGACGCCCCACTGATCACCAACCCCGGCGGGCTCCTTGAGCAGGCCGTCGC GGTCGAGGAGGCCATCGACACCGCCGCGGCGAACCAGTTGATGAACAATGTGCCCCAAGCGCTGCAACAACTGGCCCAGC CCACGAAAAGCATCTGGCCGTTCGACCAACTGAGTGAACTCTGGAAAGCCATCTCGCCGCATCTGTCGCCGCTCAGCAAC ATCGTGTCGATGCTCAACAACCACGTGTCGATGACCAACTCGGGTGTGTCGATGGCCAGCACCTTGCACTCGATGTTGAA GGGCTTTGCTCCGGCGGCGGCTCAGGCCGTGGAAACCGCGGCGCAAAACGGGGTCCAGGCGATGAGCTCGCTGGGCAGCC AGCTGGGTTCGTCGCTGGGTTCTTCGGGTCTGGGCGCTGGGGTGGCCGCCAACTTGGGTCGGGCGGCCTCGGTCGGTTCG TTGTCGGTGCCGCAGGCCTGGGCCGCGGCCAACCAGGCGGTCACCCCGGCGGCGCGGGCGCTGCCGCTGACCAGCCTGAC CAGCGCCGCCCAAACCGCCCCCGGACACATGCTGGGCGGGCTACCGCTGGGGCAACTGACCAATAGCGGCGGCGGGTTCG GCGGGGTTAGCAATGCGTTGCGGATGCCGCCGCGGGCGTACGTAATGCCCCGTGTGCCCGCCGCCGGGTAA
Upstream 100 bases:
>100_bases CATCTGGGGTTGTGACTACTTGAGAGAATTTGACCTGTTGCCGACGTTGTTTGCTGTCCATCATTGGTGCTAGTTATGGC CGAGCGGAAGGATTATCGAA
Downstream 100 bases:
>100_bases CGCCGATCCGCACGCAATGCGGGCCCTCTATGCGGGCAGCGATCTTGGTGGCCTCATCCACCGATGGCGCGCTCAACGGC GAAAGTCCTGCAGTGCGGCG
Product: PPE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MVDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLMVAAASPYVAWMSVT AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAA TATEALLPFEDAPLITNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLSN IVSMLNNHVSMTNSGVSMASTLHSMLKGFAPAAAQAVETAAQNGVQAMSSLGSQLGSSLGSSGLGAGVAANLGRAASVGS LSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHMLGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG
Sequences:
>Translated_396_residues MVDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLMVAAASPYVAWMSVT AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAA TATEALLPFEDAPLITNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLSN IVSMLNNHVSMTNSGVSMASTLHSMLKGFAPAAAQAVETAAQNGVQAMSSLGSQLGSSLGSSGLGAGVAANLGRAASVGS LSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHMLGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG >Mature_396_residues MVDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIGSSAGLMVAAASPYVAWMSVT AGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMILIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAA TATEALLPFEDAPLITNPGGLLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLSN IVSMLNNHVSMTNSGVSMASTLHSMLKGFAPAAAQAVETAAQNGVQAMSSLGSQLGSSLGSSGLGAGVAANLGRAASVGS LSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHMLGGLPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPE19_MYCTU (Q11031)
Other databases:
- EMBL: BX842576 - EMBL: AE000516 - PIR: H70741 - RefSeq: NP_335855.1 - RefSeq: YP_177801.1 - ProteinModelPortal: Q11031 - SMR: Q11031 - EnsemblBacteria: EBMYCT00000000361 - EnsemblBacteria: EBMYCT00000070165 - GeneID: 886819 - GeneID: 924490 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1406 - KEGG: mtu:Rv1361c - TIGR: MT1406 - TubercuList: Rv1361c - GeneTree: EBGT00050000014887 - HOGENOM: HBG572308 - OMA: GMENTHL - ProtClustDB: CLSK799788 - InterPro: IPR022171 - InterPro: IPR000030
Pfam domain/function: PF12484 PE_PPE_C; PF00823 PPE
EC number: NA
Molecular weight: Translated: 40016; Mature: 40016
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00501 SPASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI CCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG EEEHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHH LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH IVSMLNNHVSMTNSGVSMASTLHSMLKGFAPAAAQAVETAAQNGVQAMSSLGSQLGSSLG HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSGLGAGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHMLGG CCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCHHHHHHHHHCCCCHHCCC LPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG CCHHHHCCCCCCCCCHHHHHCCCCCCEECCCCCCCC >Mature Secondary Structure MVDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI CCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAATAATATEALLPFEDAPLITNPGG EEEHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHH LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAISPHLSPLSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH IVSMLNNHVSMTNSGVSMASTLHSMLKGFAPAAAQAVETAAQNGVQAMSSLGSQLGSSLG HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSGLGAGVAANLGRAASVGSLSVPQAWAAANQAVTPAARALPLTSLTSAAQTAPGHMLGG CCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCHHHHHHHHHCCCCHHCCC LPLGQLTNSGGGFGGVSNALRMPPRAYVMPRVPAAG CCHHHHCCCCCCCCCHHHHHCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036