| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148660842
Identifier: 148660842
GI number: 148660842
Start: 1180705
End: 1181886
Strand: Direct
Name: 148660842
Synonym: MRA_1067
Alternate gene names: NA
Gene position: 1180705-1181886 (Clockwise)
Preceding gene: 148660840
Following gene: 148660843
Centisome position: 26.71
GC content: 66.92
Gene sequence:
>1182_bases ATGAGCGTTATGAACGGCCGGGAGGTCGCTCGAGAGAGCAGAGATGCCCAGGTCTTCGAGTTCGGCACCGCACCGGGCTC CGCCGTGGTCAAGATTCCGGTGCAGGGCGGTCCGATCGGTGGCATCGCCATCAGCCGCGACGGCAGTCTGCTGGTAGTGA CCAACAACGGCACCGACACCGTCTCGGTCGTCGGCACCGACACCTGCCGGGTCACCCAGACCGTCACCAGTGTCAACGAA CCGTTCGCGATCGCCATGGGCAATGCGGAAGCCAACCGCGCGTACGTCAGCACGGTGTCGTCGGCGTACGACGCGATCGC GGTCATCGACGTGGCCACGAACACCGTTCTCGGCACCCATCCGCTGGCGCTCAGTGTGAGCGACCTGACACTCAGCCCGG ACGACAAGTACCTGTACGTCAGCCGAAATGGCACTCGCGGTGCTGACGTTGCGGTGCTGGACACGACGACGGGCGCACTG ATCGACGTCGTAGACGTTTCCCAGGCGCCGGGCACCACCACGCAATGCGTGCGGATGAGCCCGGACGGAAGTGTCCTGTA CGTCGGCGCCAATGGGCCATCCGGCGGCCTGCTCGTCGTGATCACGACCCGCGCGCAGTCCGACGGGGGACGCATCGGGA GTCGCTCGCGTTCGCGGCAGAAGAGCTCCAAACCCCGGGGTAACCAGGCGGCGGCGGGCTTGCGCGTGGTGGCGACCATC GACATCGGGTCATCGGTCCGCGACGTCGCGCTCAGCCCCGACGGTGCCATCGCCTACGTCGCCAGCTGCGGCTCCGACTT CGGGGCAGTGGTCGACGTCATCGACACTCGCACCCACCAGATCACCAGCTCGCGCGCGATCAGCGAGATCGGCGGGTTGG TCACCCGGGTGAGCGTTAGCGGCGACGCGGATCGCGCCTACTTGGTCAGCGAGGATCGGGTGACCGTGCTGTGCACCCGT ACGCACGATGTCATCGGCACGATCAGGACCGGCCAGCCGTCGTGCGTGGTCGAGAGCCCGGACGGAAAGTACCTGTACAT CGCCGACTACTCCGGCACCATCACCAGGACAGCGGTTGCCTCGACCATCGTGTCCGGGACCGAGCAGCTGGCGCTACAGC GCCGCGGGTCTATGCAGTGGTTCTCGCCTGAGCTGCAGCAGTACGCGCCGGCGCTCGCCTAG
Upstream 100 bases:
>100_bases TGTCGCAAGCCTGGAGGCCCGCAGACACAGCAAGCGAGGAGCGGCGCGTATGAGCCGCGCCGGCGACGATGCGGAACGAA GTGATGAGGAGGAGCGGCGC
Downstream 100 bases:
>100_bases CTCGAACGCGCTTCTCGGGGGAACCCGTTTCTCATGACTTCTCGCGGCGATAGCATTCGCCCGAGGAGGACATGAGGCGC GCCGAGACCCGTAAGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Surface Layer Protein
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNE PFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGAL IDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRVTVLCTR THDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVASTIVSGTEQLALQRRGSMQWFSPELQQYAPALA
Sequences:
>Translated_393_residues MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNE PFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGAL IDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRVTVLCTR THDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVASTIVSGTEQLALQRRGSMQWFSPELQQYAPALA >Mature_392_residues SVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEP FAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATID IGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRVTVLCTRT HDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVASTIVSGTEQLALQRRGSMQWFSPELQQYAPALA
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40711; Mature: 40580
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT CCCCCCHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEECCCCEEEEECCCCCE VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH EEEEECCCEEEEEHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEEEEECCCEECCC PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS CEEEEEECEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEEC PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI CCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEE DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS ECCCCCEEEEECCCCCEEEEEECCCCCCHHEEEECCCCHHHHHHHHHHHHCCEEEEEEEC GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA CCCCEEEEEECCCEEEEEEECCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEHHHHH STIVSGTEQLALQRRGSMQWFSPELQQYAPALA HHHHCCHHHHHHHHCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure SVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT CCCCCHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEECCCCEEEEECCCCCE VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH EEEEECCCEEEEEHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEEEEECCCEECCC PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS CEEEEEECEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEEC PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI CCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEE DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS ECCCCCEEEEECCCCCEEEEEECCCCCCHHEEEECCCCHHHHHHHHHHHHCCEEEEEEEC GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA CCCCEEEEEECCCEEEEEEECCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEHHHHH STIVSGTEQLALQRRGSMQWFSPELQQYAPALA HHHHCCHHHHHHHHCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA