Click here to switch to the map view.

The map label for this gene is 148660660

Identifier: 148660660

GI number: 148660660

Start: 981813

End: 982574

Strand: Reverse

Name: 148660660

Synonym: MRA_0890

Alternate gene names: NA

Gene position: 982574-981813 (Counterclockwise)

Preceding gene: 148660661

Following gene: 148660656

Centisome position: 22.23

GC content: 68.64

Gene sequence:

>762_bases
ATGCGGGAACTCAAAGTCGTTGGGCTCGATGCCGACGGCAAAAACATCATCTGCCAGGGTGCCATCCCGTCCGAACAGTT
CAAGCTGCCGGTCGACGACCGACTGCGGGCGGCGCTACGGGACGACTCCGTCCAGCCGGAGCAAGCCCAGCTGGACATCG
AGGTCACCAACGTGCTGAGCCCCAAGGAGATTCAGGCCCGAATTCGGGCCGGCGCGTCTGTCGAACAGGTCGCTGCGGCA
TCGGGCTCCGACATCGCCCGTATCCGCCGGTTTGCCCACCCGGTACTGTTGGAACGCTCGCGCGCGGCCGAGCTGGCAAC
CGCGGCGCACCCGGTCCTGGCCGACGGCCCGGCGGTGCTGACCATGCAGGAGACCGTCGCCGCGGCCCTGGTGGCACGCG
GCCTTAACCCCGACAGCCTCACCTGGGACGCGTGGCGCAACGAGGACAGTCGCTGGACGGTGCAGCTTGCCTGGAAGGCT
GGCCGCTCCGACAACCTGGCGCATTTCCGCTTCACCCCCGGCGCCCACGGCGGAACCGCCACCGCGATCGACGACACGGC
CCATGAGCTGATCAACCCCACCTTCAATCGCCCGCTACGGCCGTTGGCGCCGGTCGCCCATCTCGACTTCGATGAGCCCG
AGCCCGCACAGCCGACGCTCACGGTGCCGTCCGCACAGCCGGTCAGCAACCGACGAGGCAAACCCGCCATACCTGCCTGG
GAAGATGTGCTGCTCGGGGTGCGCTCAGGCGGGCGTCGCTAG

Upstream 100 bases:

>100_bases
GACACCTCCGCGTGTCAACGAGGCTAACGGCGTTTACCGCACTAGAGTGCGCACGTAACAGGTCCGGCGTTGTCCTGCCC
GGAGCCTGCGAGGAGAAGCC

Downstream 100 bases:

>100_bases
CCGTCCCCCAACGTCAAGGCGAGCAGCGCCAACCACGCGCCCGCCACGCCCACTGCCGCGCCAAGCACGAACCAGCGCAG
CACTGGGGTGCGGCGCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRELKVVGLDADGKNIICQGAIPSEQFKLPVDDRLRAALRDDSVQPEQAQLDIEVTNVLSPKEIQARIRAGASVEQVAAA
SGSDIARIRRFAHPVLLERSRAAELATAAHPVLADGPAVLTMQETVAAALVARGLNPDSLTWDAWRNEDSRWTVQLAWKA
GRSDNLAHFRFTPGAHGGTATAIDDTAHELINPTFNRPLRPLAPVAHLDFDEPEPAQPTLTVPSAQPVSNRRGKPAIPAW
EDVLLGVRSGGRR

Sequences:

>Translated_253_residues
MRELKVVGLDADGKNIICQGAIPSEQFKLPVDDRLRAALRDDSVQPEQAQLDIEVTNVLSPKEIQARIRAGASVEQVAAA
SGSDIARIRRFAHPVLLERSRAAELATAAHPVLADGPAVLTMQETVAAALVARGLNPDSLTWDAWRNEDSRWTVQLAWKA
GRSDNLAHFRFTPGAHGGTATAIDDTAHELINPTFNRPLRPLAPVAHLDFDEPEPAQPTLTVPSAQPVSNRRGKPAIPAW
EDVLLGVRSGGRR
>Mature_253_residues
MRELKVVGLDADGKNIICQGAIPSEQFKLPVDDRLRAALRDDSVQPEQAQLDIEVTNVLSPKEIQARIRAGASVEQVAAA
SGSDIARIRRFAHPVLLERSRAAELATAAHPVLADGPAVLTMQETVAAALVARGLNPDSLTWDAWRNEDSRWTVQLAWKA
GRSDNLAHFRFTPGAHGGTATAIDDTAHELINPTFNRPLRPLAPVAHLDFDEPEPAQPTLTVPSAQPVSNRRGKPAIPAW
EDVLLGVRSGGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y883_MYCTU (P64739)

Other databases:

- EMBL:   BX842574
- EMBL:   AE000516
- PIR:   H70780
- RefSeq:   NP_215398.1
- RefSeq:   NP_335334.1
- EnsemblBacteria:   EBMYCT00000000840
- EnsemblBacteria:   EBMYCT00000070060
- GeneID:   885139
- GeneID:   926216
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT0906
- KEGG:   mtu:Rv0883c
- TIGR:   MT0906
- TubercuList:   Rv0883c
- GeneTree:   EBGT00050000015369
- HOGENOM:   HBG567607
- OMA:   MRELRVV
- ProtClustDB:   CLSK790807
- GO:   GO:0040007
- InterPro:   IPR021421

Pfam domain/function: PF11268 DUF3071

EC number: NA

Molecular weight: Translated: 27373; Mature: 27373

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELKVVGLDADGKNIICQGAIPSEQFKLPVDDRLRAALRDDSVQPEQAQLDIEVTNVLS
CCCEEEEEECCCCCEEEEECCCCHHHEECCHHHHHHHHHHCCCCCCCHHEEEEEEECCCC
PKEIQARIRAGASVEQVAAASGSDIARIRRFAHPVLLERSRAAELATAAHPVLADGPAVL
HHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEE
TMQETVAAALVARGLNPDSLTWDAWRNEDSRWTVQLAWKAGRSDNLAHFRFTPGAHGGTA
EHHHHHHHHHHHCCCCCCCEEEHHHCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCC
TAIDDTAHELINPTFNRPLRPLAPVAHLDFDEPEPAQPTLTVPSAQPVSNRRGKPAIPAW
CCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCH
EDVLLGVRSGGRR
HHHHHHHCCCCCC
>Mature Secondary Structure
MRELKVVGLDADGKNIICQGAIPSEQFKLPVDDRLRAALRDDSVQPEQAQLDIEVTNVLS
CCCEEEEEECCCCCEEEEECCCCHHHEECCHHHHHHHHHHCCCCCCCHHEEEEEEECCCC
PKEIQARIRAGASVEQVAAASGSDIARIRRFAHPVLLERSRAAELATAAHPVLADGPAVL
HHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEE
TMQETVAAALVARGLNPDSLTWDAWRNEDSRWTVQLAWKAGRSDNLAHFRFTPGAHGGTA
EHHHHHHHHHHHCCCCCCCEEEHHHCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCC
TAIDDTAHELINPTFNRPLRPLAPVAHLDFDEPEPAQPTLTVPSAQPVSNRRGKPAIPAW
CCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCH
EDVLLGVRSGGRR
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036