Click here to switch to the map view.

The map label for this gene is yccF [H]

Identifier: 148660647

GI number: 148660647

Start: 968650

End: 969039

Strand: Reverse

Name: yccF [H]

Synonym: MRA_0877

Alternate gene names: 148660647

Gene position: 969039-968650 (Counterclockwise)

Preceding gene: 148660649

Following gene: 148660646

Centisome position: 21.92

GC content: 61.79

Gene sequence:

>390_bases
ATGCGACTAATCCTGAACGTTATCTGGTTGGTGTTCGGTGGCCTCTGGCTGGCCCTCGGGTACCTGCTGGCGTCGCTTGT
CTGCTTCCTGCTCATCATCACCATTCCGTTTGGCTTCGCGGCGCTGCGCATCGCGTCGTACGCGTTGTGGCCGTTCGGCC
GGACGATCGTCGAAAAGCCAACCGCCGGGACCGGGGCCTTGATCGGCAACGTCATCTGGGTGCTGCTGTTCGGGATCTGG
CTGGCCCTCGGGCATTTGGTGAGTGCCGCGGCAATGGCAGTCACGATCATCGGCATTCCGCTAGCACTGGCCAACTTGAA
ACTGATCCCGGTGTCGCTGGTGCCGCTGGGCAAGGACATCGTCGGGGTCAACTCACAGGTGCCCACATGA

Upstream 100 bases:

>100_bases
GGGACGCGATGACGATCTGAAGATCCTACTCGGATCGTCGGCCGCCGAGCACCCCTGCTTACCCCTCACGCGGTAGGCTT
GCGCTACCGCTGGAGGCGAT

Downstream 100 bases:

>100_bases
CACTGACCGCGCTGGGCATGCCGGCGCTGCGCAGCCGCACCAACGGCATTGCCGACCCGCGGGTCGTACCCACCACTGGC
CCTTTGGTGGACACGTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRLILNVIWLVFGGLWLALGYLLASLVCFLLIITIPFGFAALRIASYALWPFGRTIVEKPTAGTGALIGNVIWVLLFGIW
LALGHLVSAAAMAVTIIGIPLALANLKLIPVSLVPLGKDIVGVNSQVPT

Sequences:

>Translated_129_residues
MRLILNVIWLVFGGLWLALGYLLASLVCFLLIITIPFGFAALRIASYALWPFGRTIVEKPTAGTGALIGNVIWVLLFGIW
LALGHLVSAAAMAVTIIGIPLALANLKLIPVSLVPLGKDIVGVNSQVPT
>Mature_129_residues
MRLILNVIWLVFGGLWLALGYLLASLVCFLLIITIPFGFAALRIASYALWPFGRTIVEKPTAGTGALIGNVIWVLLFGIW
LALGHLVSAAAMAVTIIGIPLALANLKLIPVSLVPLGKDIVGVNSQVPT

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=134, Percent_Identity=36.5671641791045, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 13688; Mature: 13688

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLILNVIWLVFGGLWLALGYLLASLVCFLLIITIPFGFAALRIASYALWPFGRTIVEKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
TAGTGALIGNVIWVLLFGIWLALGHLVSAAAMAVTIIGIPLALANLKLIPVSLVPLGKDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCHH
VGVNSQVPT
CCCCCCCCC
>Mature Secondary Structure
MRLILNVIWLVFGGLWLALGYLLASLVCFLLIITIPFGFAALRIASYALWPFGRTIVEKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
TAGTGALIGNVIWVLLFGIWLALGHLVSAAAMAVTIIGIPLALANLKLIPVSLVPLGKDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCHH
VGVNSQVPT
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]