| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is ccmD [C]
Identifier: 148653964
GI number: 148653964
Start: 2704098
End: 2704301
Strand: Direct
Name: ccmD [C]
Synonym: PsycPRwf_2167
Alternate gene names: 148653964
Gene position: 2704098-2704301 (Clockwise)
Preceding gene: 148653963
Following gene: 148653965
Centisome position: 90.77
GC content: 46.57
Gene sequence:
>204_bases ATGCAGCCGTATTTTTATAGCTTTCAAGAGTTTTTGGCCATGGGTAAGCATGGTATGTATGTCTGGAGCACTTGGGTTCT TACCTTAATTGTGGTACTGGGCTTTGTCTTATATAGTGTGCACCAACGTCGCCAACTGGTCAAAGATCTAAAAATCCAGC ATACCCGTCAACAGCAGCGCAAGCAAGCTCAGCGCCGCCCGTAA
Upstream 100 bases:
>100_bases CCTTAGCCATTTATCGCACCAACACCCTTATCCTACGCCGCGATCAAAATAAGGCTTGGGTCAAAGAATATGTGCGTGAC GCCAAATAAAGGAGCGACTT
Downstream 100 bases:
>100_bases GCAATACTCTATCTGACTAAATTAGGCCTGTTTTTTGGTGCATGTTTTTATAATGGCTCAAAAACAGAACCCAACTTTTG CAACAACACTCAATGATTTG
Product: Heme exporter protein CcmD
Products: NA
Alternate protein names: Cytochrome C Biogenesis Protein CcmD
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MQPYFYSFQEFLAMGKHGMYVWSTWVLTLIVVLGFVLYSVHQRRQLVKDLKIQHTRQQQRKQAQRRP
Sequences:
>Translated_67_residues MQPYFYSFQEFLAMGKHGMYVWSTWVLTLIVVLGFVLYSVHQRRQLVKDLKIQHTRQQQRKQAQRRP >Mature_67_residues MQPYFYSFQEFLAMGKHGMYVWSTWVLTLIVVLGFVLYSVHQRRQLVKDLKIQHTRQQQRKQAQRRP
Specific function: Required For The Export Of Heme To The Periplasm For The Biogenesis Of C-Type Cytochromes (Potential). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8197; Mature: 8197
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPYFYSFQEFLAMGKHGMYVWSTWVLTLIVVLGFVLYSVHQRRQLVKDLKIQHTRQQQR CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQAQRRP HHHHCCC >Mature Secondary Structure MQPYFYSFQEFLAMGKHGMYVWSTWVLTLIVVLGFVLYSVHQRRQLVKDLKIQHTRQQQR CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQAQRRP HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA