| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653848
Identifier: 148653848
GI number: 148653848
Start: 2559130
End: 2560281
Strand: Direct
Name: 148653848
Synonym: PsycPRwf_2051
Alternate gene names: NA
Gene position: 2559130-2560281 (Clockwise)
Preceding gene: 148653846
Following gene: 148653851
Centisome position: 85.91
GC content: 43.32
Gene sequence:
>1152_bases ATGCTAAAAAAATTATTTAAGCCAAAATTTGCCAAATTCGACAAAAAATATACCACGTTGAGCGCTCATGACGAATCGAT TATGCAAATGGTAGTCGCCGACATCACAGACTATGTCAAAAAGTCCAAAAAAATCAATCATCTCGATCATCACACACGCG CCGTTCATGCCAAAGGCTATTGCGCGCTAAAAGCCAAGTTTGAGGTGCTAGATAATCTACCCGAAGCCTATGCACAAGGC TTGTATGCCAAAGCTGGCACCCATGATGCGGTGATTCGTTTTTCTAATGCCCAAGGCAATATAGCCCCAGATAGACGACT TGGTATGGGCATTGGACTGGCCTTCAAGATATTTGATGTCCCCGGTAAAAAACTGACCCCTGATGACCCAGATTGCACCA CCTTTGATTATGCACTGGTCAACTCACCGATATTCTTTACCAACTCTGTAGAAGATTATGCTTATTTATCGAAGCTGGTG TTTGGCGTTAATGAGTATCTGGGTAATAATAATCTTGGTTTACTAAAATTTGGCTTTCACTGGCTCACTAAATACGGCAA AGAGCTTCCTGATTTACAAGGACTGCAAACCCTAAATGCGTTTCGTAAAATAGCGACGGTTAAGCCCAAAAACCCTTGGT TGTATGATTACTTTTCACAAGGCGTGGTGCGTCATGGCGACTATATGGGTAAGATTAGAATAACGCCGACCAAATCCGCC AAACAAAAAATCAAACAGCCCAAGATTCATTTGTTTACAAAAGATGAGGCGATTAGACCGGTATTATTGGATGAAATTCG TACCCACGATTATGAGTATGACGTTCAAATTCAGCTGTGCCGTAATGTCAAAAAACAACCTATCGAAAAGATCACTCAAG AGTGGGATGAGTCTAAAGCGCCCTTCGTGAGCATTGGCAAGCTGACTATCCCTAAGCAAGAGGTCACTGACGATGGTAAC TTTGCGGCCATGGAACACTTATCCTTCTCTGTGTTTAGAGCCTTGGAAGAAAACCGTCCAATTGGACGTATTCAACAGTC TCGCCTGCAAGCCTATCGCACCTCTTCTAAAGTTCGCCATGAACAAAATGCGGTGCAGCGCCGTGAGCCGGCCAGTCTTG CACAAGTTTTTGATACGTCCGCTTTTGTTTAA
Upstream 100 bases:
>100_bases TACATATTAGTGGCAGAACCTAATCATAAGTTAGCACCTTATGCATAAAACATTACTTATTATAAGTAGGCCACCCACAA CTTATTATAGGTAGCCTAAT
Downstream 100 bases:
>100_bases TGCGCTTGGTTTTTCAGTGTTATAGGCGGGGCGGTTTATTGGCATAGTAAGGGTCATTCTCTCTTAGCCACCAGTTCATA TTATGCTGGCGGCTACGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MLKKLFKPKFAKFDKKYTTLSAHDESIMQMVVADITDYVKKSKKINHLDHHTRAVHAKGYCALKAKFEVLDNLPEAYAQG LYAKAGTHDAVIRFSNAQGNIAPDRRLGMGIGLAFKIFDVPGKKLTPDDPDCTTFDYALVNSPIFFTNSVEDYAYLSKLV FGVNEYLGNNNLGLLKFGFHWLTKYGKELPDLQGLQTLNAFRKIATVKPKNPWLYDYFSQGVVRHGDYMGKIRITPTKSA KQKIKQPKIHLFTKDEAIRPVLLDEIRTHDYEYDVQIQLCRNVKKQPIEKITQEWDESKAPFVSIGKLTIPKQEVTDDGN FAAMEHLSFSVFRALEENRPIGRIQQSRLQAYRTSSKVRHEQNAVQRREPASLAQVFDTSAFV
Sequences:
>Translated_383_residues MLKKLFKPKFAKFDKKYTTLSAHDESIMQMVVADITDYVKKSKKINHLDHHTRAVHAKGYCALKAKFEVLDNLPEAYAQG LYAKAGTHDAVIRFSNAQGNIAPDRRLGMGIGLAFKIFDVPGKKLTPDDPDCTTFDYALVNSPIFFTNSVEDYAYLSKLV FGVNEYLGNNNLGLLKFGFHWLTKYGKELPDLQGLQTLNAFRKIATVKPKNPWLYDYFSQGVVRHGDYMGKIRITPTKSA KQKIKQPKIHLFTKDEAIRPVLLDEIRTHDYEYDVQIQLCRNVKKQPIEKITQEWDESKAPFVSIGKLTIPKQEVTDDGN FAAMEHLSFSVFRALEENRPIGRIQQSRLQAYRTSSKVRHEQNAVQRREPASLAQVFDTSAFV >Mature_383_residues MLKKLFKPKFAKFDKKYTTLSAHDESIMQMVVADITDYVKKSKKINHLDHHTRAVHAKGYCALKAKFEVLDNLPEAYAQG LYAKAGTHDAVIRFSNAQGNIAPDRRLGMGIGLAFKIFDVPGKKLTPDDPDCTTFDYALVNSPIFFTNSVEDYAYLSKLV FGVNEYLGNNNLGLLKFGFHWLTKYGKELPDLQGLQTLNAFRKIATVKPKNPWLYDYFSQGVVRHGDYMGKIRITPTKSA KQKIKQPKIHLFTKDEAIRPVLLDEIRTHDYEYDVQIQLCRNVKKQPIEKITQEWDESKAPFVSIGKLTIPKQEVTDDGN FAAMEHLSFSVFRALEENRPIGRIQQSRLQAYRTSSKVRHEQNAVQRREPASLAQVFDTSAFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020835 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase [H]
EC number: NA
Molecular weight: Translated: 43755; Mature: 43755
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKLFKPKFAKFDKKYTTLSAHDESIMQMVVADITDYVKKSKKINHLDHHTRAVHAKGY CCHHHHCCHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCE CALKAKFEVLDNLPEAYAQGLYAKAGTHDAVIRFSNAQGNIAPDRRLGMGIGLAFKIFDV EEEHHHHHHHHCCHHHHHCCCHHCCCCCCEEEEEECCCCCCCCCHHHCCCCCEEEEEEEC PGKKLTPDDPDCTTFDYALVNSPIFFTNSVEDYAYLSKLVFGVNEYLGNNNLGLLKFGFH CCCCCCCCCCCCCEEEHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH WLTKYGKELPDLQGLQTLNAFRKIATVKPKNPWLYDYFSQGVVRHGDYMGKIRITPTKSA HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCHHHCCCEEEEEEECCCHHH KQKIKQPKIHLFTKDEAIRPVLLDEIRTHDYEYDVQIQLCRNVKKQPIEKITQEWDESKA HHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCC PFVSIGKLTIPKQEVTDDGNFAAMEHLSFSVFRALEENRPIGRIQQSRLQAYRTSSKVRH CEEEECEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH EQNAVQRREPASLAQVFDTSAFV HHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MLKKLFKPKFAKFDKKYTTLSAHDESIMQMVVADITDYVKKSKKINHLDHHTRAVHAKGY CCHHHHCCHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCE CALKAKFEVLDNLPEAYAQGLYAKAGTHDAVIRFSNAQGNIAPDRRLGMGIGLAFKIFDV EEEHHHHHHHHCCHHHHHCCCHHCCCCCCEEEEEECCCCCCCCCHHHCCCCCEEEEEEEC PGKKLTPDDPDCTTFDYALVNSPIFFTNSVEDYAYLSKLVFGVNEYLGNNNLGLLKFGFH CCCCCCCCCCCCCEEEHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH WLTKYGKELPDLQGLQTLNAFRKIATVKPKNPWLYDYFSQGVVRHGDYMGKIRITPTKSA HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCHHHCCCEEEEEEECCCHHH KQKIKQPKIHLFTKDEAIRPVLLDEIRTHDYEYDVQIQLCRNVKKQPIEKITQEWDESKA HHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCC PFVSIGKLTIPKQEVTDDGNFAAMEHLSFSVFRALEENRPIGRIQQSRLQAYRTSSKVRH CEEEECEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH EQNAVQRREPASLAQVFDTSAFV HHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]