| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653809
Identifier: 148653809
GI number: 148653809
Start: 2505142
End: 2505990
Strand: Direct
Name: 148653809
Synonym: PsycPRwf_2012
Alternate gene names: NA
Gene position: 2505142-2505990 (Clockwise)
Preceding gene: 148653808
Following gene: 148653810
Centisome position: 84.09
GC content: 43.7
Gene sequence:
>849_bases ATGAGCCAACTAATTCGTTTAAAAGACATCCAATCAACTCACCGTGATATTATTGGTGATGACTACTATGATCCAACTGG CAAAGCTGCCTATGGTGCTGGTGAAGAAAAAATCGGTAAAATTGAAGGCGCTTTAGTTGAAGATATCACTGGCCGTATCC GTTATTTAATCGTAGATGTGGGTGGCTGGTTTAACTCAAAAGAAGTTTTAGTTCCTGCAGGTCTTGCCCGTATTGTTGGT GATGATGTGTTCTTTGACTCTTTAACTAAGTCTCAAGTAGAAGCCATGGAAGAGTATGACCATGACTATCAGTACAGCTA TAAAGAGCAAGCGAACAAAGACCGCGCCGCCTTTGTTGCTGACACTGTACCTGCCGCTGAGCGTGTAGATATCAAAGAAG ATTACTACAATGCACCAAACACTTTAGAGCTATTAGAAGAGCGTCTAACAGTTAACAAAGATCGCATCGTAGCTGGCTTG GTAAAAGTAGGCAAACATGTGGTTACAGAGAACCGTGCTGTAGATGTAGAGCTTGAAGAAGAGCATGCCCATATTGAGCG TACTGAAGTTAACCGTCCTACCACTCGCCGTATCGGTGATGATGCCGGTGCTGACTCAGTAGAAGTTGAGCTAGAAGCTG AGCGTGCTAATGTAAACAAAGAAACTTACGTTACTGAAGAAGTGAACGTAGGCAAAACTACTGAGCGTCACACAGAGACT ATCAATGAAACTATCCAGCGCGAAGAGCTAGATATTGACCGTGATGGTAACATTGTCGACCGTGAAGGTAACATTGTAGA GCGTGATGACCTAACTGCTGATGATGTACGCGCTGCTCGTGGCAAATAA
Upstream 100 bases:
>100_bases CTGTCAATGATTTTGGTAATGACTACCGTGCGAAAAATTAACTTTAGCAATAAATCCTTGATGGATTTTCAATTTAAATA ATAAGACAAGGAAAACTATA
Downstream 100 bases:
>100_bases GCCCAAAGCCTTCTTATCTGCCCTAGCATAATATTAGTAAATTAGTTTTTACGATAATGAAAGCAGATAGGTACAAGCAA TGACGTAGAAAGCCAGGGCA
Product: PRC-barrel domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSQLIRLKDIQSTHRDIIGDDYYDPTGKAAYGAGEEKIGKIEGALVEDITGRIRYLIVDVGGWFNSKEVLVPAGLARIVG DDVFFDSLTKSQVEAMEEYDHDYQYSYKEQANKDRAAFVADTVPAAERVDIKEDYYNAPNTLELLEERLTVNKDRIVAGL VKVGKHVVTENRAVDVELEEEHAHIERTEVNRPTTRRIGDDAGADSVEVELEAERANVNKETYVTEEVNVGKTTERHTET INETIQREELDIDRDGNIVDREGNIVERDDLTADDVRAARGK
Sequences:
>Translated_282_residues MSQLIRLKDIQSTHRDIIGDDYYDPTGKAAYGAGEEKIGKIEGALVEDITGRIRYLIVDVGGWFNSKEVLVPAGLARIVG DDVFFDSLTKSQVEAMEEYDHDYQYSYKEQANKDRAAFVADTVPAAERVDIKEDYYNAPNTLELLEERLTVNKDRIVAGL VKVGKHVVTENRAVDVELEEEHAHIERTEVNRPTTRRIGDDAGADSVEVELEAERANVNKETYVTEEVNVGKTTERHTET INETIQREELDIDRDGNIVDREGNIVERDDLTADDVRAARGK >Mature_281_residues SQLIRLKDIQSTHRDIIGDDYYDPTGKAAYGAGEEKIGKIEGALVEDITGRIRYLIVDVGGWFNSKEVLVPAGLARIVGD DVFFDSLTKSQVEAMEEYDHDYQYSYKEQANKDRAAFVADTVPAAERVDIKEDYYNAPNTLELLEERLTVNKDRIVAGLV KVGKHVVTENRAVDVELEEEHAHIERTEVNRPTTRRIGDDAGADSVEVELEAERANVNKETYVTEEVNVGKTTERHTETI NETIQREELDIDRDGNIVDREGNIVERDDLTADDVRAARGK
Specific function: Unknown
COG id: COG3861
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011756 - InterPro: IPR019060 - InterPro: IPR014747 - InterPro: IPR007903 - InterPro: IPR011033 [H]
Pfam domain/function: PF09557 DUF2382; PF05239 PRC [H]
EC number: NA
Molecular weight: Translated: 31782; Mature: 31651
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLIRLKDIQSTHRDIIGDDYYDPTGKAAYGAGEEKIGKIEGALVEDITGRIRYLIVDV CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEE GGWFNSKEVLVPAGLARIVGDDVFFDSLTKSQVEAMEEYDHDYQYSYKEQANKDRAAFVA CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHEEEE DTVPAAERVDIKEDYYNAPNTLELLEERLTVNKDRIVAGLVKVGKHVVTENRAVDVELEE CCCCCCHHCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC EHAHIERTEVNRPTTRRIGDDAGADSVEVELEAERANVNKETYVTEEVNVGKTTERHTET CHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEEHHHCCCCCCEEEEECCCCCCCHHHHHHH INETIQREELDIDRDGNIVDREGNIVERDDLTADDVRAARGK HHHHHHHHHCCCCCCCCEECCCCCEECCCCCCHHHHHHHCCC >Mature Secondary Structure SQLIRLKDIQSTHRDIIGDDYYDPTGKAAYGAGEEKIGKIEGALVEDITGRIRYLIVDV CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEE GGWFNSKEVLVPAGLARIVGDDVFFDSLTKSQVEAMEEYDHDYQYSYKEQANKDRAAFVA CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHEEEE DTVPAAERVDIKEDYYNAPNTLELLEERLTVNKDRIVAGLVKVGKHVVTENRAVDVELEE CCCCCCHHCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC EHAHIERTEVNRPTTRRIGDDAGADSVEVELEAERANVNKETYVTEEVNVGKTTERHTET CHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEEHHHCCCCCCEEEEECCCCCCCHHHHHHH INETIQREELDIDRDGNIVDREGNIVERDDLTADDVRAARGK HHHHHHHHHCCCCCCCCEECCCCCEECCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]