| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653793
Identifier: 148653793
GI number: 148653793
Start: 2486375
End: 2488126
Strand: Direct
Name: 148653793
Synonym: PsycPRwf_1996
Alternate gene names: NA
Gene position: 2486375-2488126 (Clockwise)
Preceding gene: 148653792
Following gene: 148653794
Centisome position: 83.46
GC content: 31.39
Gene sequence:
>1752_bases ATGGCAAATGTGTTTAATCTTAGTAAACGACTTTTAGAACTTATTAATAATGAAGATAATTTTGCTATCGCCTTAGTAGG TGAATGGGGTATCGGTAAGACACATTTCTGGAATGAGTTCTATAAGGAGAATCACTTATCTTTTAAAACAAAAAAATACG CATATGTTTCCCTATTTGGTATCGACTCATTAGAGTCTCTAAAGTTTGAAATAGCTCTAAAAACTCACAATACTGGACAA GAAAAGGATAATTTATCTTATTTAAAGACTGGTTTTAAAAAAGTACTAGAAAACGTTAACTTTTCTGATATAGAGGGTTC AGGGGTTACTCTATCTGTCAGTAAAGGAGTAATTAGTAGCACTTTATCTAGTATGGTTAATGATACTGTAATCTGTATCG ATGATATCGAGAGACTTTCAGATAAATTAGATATTAAAGACGTGATGGGACTAATCAACCATCTAAACTTGGAAAAGAAC TGTAAAATCATCGTTCTGCTAGATCAAGCAAAAGCTAAAGAGCAGTTTATAGAATACAAAGAAAAGGTTTTTGATGATGT TTTAGTACTAGATGAGTCTTTATCTGTAATACAGAAAATTGTCGATGACAAAATGTTTGATGTCTACAAGGATTTCTACA CAACAACTGGGGTCAAGAACTTACGGTTTTACCAAAGAGTCAATAAAATTTATACACTTTTTATCAAGTCATTCTCTAAT CTATCAGAAACAAGTAATAAGCAAATATTAAGCTTTATTCTGGTTATAAGAATGCTATACGACATGCCTCATATGATAGA CGAAAATATAGACTTTAATTTTTTTATTGAAAGCTTTGACTCAAAACATATTCGTAATTTTAGAGGCTATCAGCTTAGAA GTGCATACAAACAAGAAGACATAACTCCAGACCATATAGTTAAATTTAATAAAATAAACAACTTTATCAACCCATTCTAC AGCTATTTCGAAATCTCAAGTTGGGGTGAGGCTGTTGTCAATTGGCTTTTAAATTTAGAACTTGATGAGAATTTAACAAA AGAACTTCTAGAAAGAGATTTAGTAACTGAAGAAACTTTAATGTCTGACAGATTAAGTTCAGAGTTACTGGCTGAGTTTC ATAATATGGAGATAGGCCCTAACTTTGCAGCACGTTTATACTATATGGCCTGTGCCAAAATCGGATCAGCTCAGCTGAAC AATCTAAGTTTTTATTGCGATATATTGGAATCCTGTGGCGAATTAAATTTAGCTATTCAGCTAGAGAATCACATTAAACA ATATATTAACACTACAATAACTGCTCAAGAGAACTCTGTTTTTATTGGTGATTTCTATTTTTTAGGTAAAGAGCCTAATG ACCGTTTTTATGATTATGTCACTGAGAAAATAGAAGAAGATCGAACACAGAATGTAAACCCTAGTACTATTTTATCAATA TTTAACAAGTATCATGAAAGCAATCGCAGTGCATACAACACTACCGACAATCAATCTATTAGACTTATTGATAAAAATAT TTTAAGAGATATCATTTGGTCTGATATCAGTACAAGAGCAGGATATCGAAAGCAATTCGTTCATTCTATTCTCTTATATC CACCTTTAAATGAAATTGAAGGAAAAGCTGAAGAAGTTCGAAAGTGGATACTAGAATTACTTGATGAAAAAATTAAAGCT AATCCTAATAGCGAACCCTCTATAAGAATGTGGTTAGAAGACACCAATAATTTAACAAAAAATCTGAGATGA
Upstream 100 bases:
>100_bases AAGAAGGCCGTCCTGTTTGGGATGGCCTTTTTTGTTGTTTAAAATTTAGATGCAGTGTTAGTATAAATCTTAAAATATAA GCACCTCAAAGGTATTGATA
Downstream 100 bases:
>100_bases TTCAGCTTTTACTTTTAATCAAATATAATCTCCATCCCCTACTATCTTAACCCGAGAAAAACTATGCCCTCAAAACCCAC CACCAAAATATTCGACGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MANVFNLSKRLLELINNEDNFAIALVGEWGIGKTHFWNEFYKENHLSFKTKKYAYVSLFGIDSLESLKFEIALKTHNTGQ EKDNLSYLKTGFKKVLENVNFSDIEGSGVTLSVSKGVISSTLSSMVNDTVICIDDIERLSDKLDIKDVMGLINHLNLEKN CKIIVLLDQAKAKEQFIEYKEKVFDDVLVLDESLSVIQKIVDDKMFDVYKDFYTTTGVKNLRFYQRVNKIYTLFIKSFSN LSETSNKQILSFILVIRMLYDMPHMIDENIDFNFFIESFDSKHIRNFRGYQLRSAYKQEDITPDHIVKFNKINNFINPFY SYFEISSWGEAVVNWLLNLELDENLTKELLERDLVTEETLMSDRLSSELLAEFHNMEIGPNFAARLYYMACAKIGSAQLN NLSFYCDILESCGELNLAIQLENHIKQYINTTITAQENSVFIGDFYFLGKEPNDRFYDYVTEKIEEDRTQNVNPSTILSI FNKYHESNRSAYNTTDNQSIRLIDKNILRDIIWSDISTRAGYRKQFVHSILLYPPLNEIEGKAEEVRKWILELLDEKIKA NPNSEPSIRMWLEDTNNLTKNLR
Sequences:
>Translated_583_residues MANVFNLSKRLLELINNEDNFAIALVGEWGIGKTHFWNEFYKENHLSFKTKKYAYVSLFGIDSLESLKFEIALKTHNTGQ EKDNLSYLKTGFKKVLENVNFSDIEGSGVTLSVSKGVISSTLSSMVNDTVICIDDIERLSDKLDIKDVMGLINHLNLEKN CKIIVLLDQAKAKEQFIEYKEKVFDDVLVLDESLSVIQKIVDDKMFDVYKDFYTTTGVKNLRFYQRVNKIYTLFIKSFSN LSETSNKQILSFILVIRMLYDMPHMIDENIDFNFFIESFDSKHIRNFRGYQLRSAYKQEDITPDHIVKFNKINNFINPFY SYFEISSWGEAVVNWLLNLELDENLTKELLERDLVTEETLMSDRLSSELLAEFHNMEIGPNFAARLYYMACAKIGSAQLN NLSFYCDILESCGELNLAIQLENHIKQYINTTITAQENSVFIGDFYFLGKEPNDRFYDYVTEKIEEDRTQNVNPSTILSI FNKYHESNRSAYNTTDNQSIRLIDKNILRDIIWSDISTRAGYRKQFVHSILLYPPLNEIEGKAEEVRKWILELLDEKIKA NPNSEPSIRMWLEDTNNLTKNLR >Mature_582_residues ANVFNLSKRLLELINNEDNFAIALVGEWGIGKTHFWNEFYKENHLSFKTKKYAYVSLFGIDSLESLKFEIALKTHNTGQE KDNLSYLKTGFKKVLENVNFSDIEGSGVTLSVSKGVISSTLSSMVNDTVICIDDIERLSDKLDIKDVMGLINHLNLEKNC KIIVLLDQAKAKEQFIEYKEKVFDDVLVLDESLSVIQKIVDDKMFDVYKDFYTTTGVKNLRFYQRVNKIYTLFIKSFSNL SETSNKQILSFILVIRMLYDMPHMIDENIDFNFFIESFDSKHIRNFRGYQLRSAYKQEDITPDHIVKFNKINNFINPFYS YFEISSWGEAVVNWLLNLELDENLTKELLERDLVTEETLMSDRLSSELLAEFHNMEIGPNFAARLYYMACAKIGSAQLNN LSFYCDILESCGELNLAIQLENHIKQYINTTITAQENSVFIGDFYFLGKEPNDRFYDYVTEKIEEDRTQNVNPSTILSIF NKYHESNRSAYNTTDNQSIRLIDKNILRDIIWSDISTRAGYRKQFVHSILLYPPLNEIEGKAEEVRKWILELLDEKIKAN PNSEPSIRMWLEDTNNLTKNLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67948; Mature: 67817
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVFNLSKRLLELINNEDNFAIALVGEWGIGKTHFWNEFYKENHLSFKTKKYAYVSLFG CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEECCEEEEEEEC IDSLESLKFEIALKTHNTGQEKDNLSYLKTGFKKVLENVNFSDIEGSGVTLSVSKGVISS CCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHH TLSSMVNDTVICIDDIERLSDKLDIKDVMGLINHLNLEKNCKIIVLLDQAKAKEQFIEYK HHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHH EKVFDDVLVLDESLSVIQKIVDDKMFDVYKDFYTTTGVKNLRFYQRVNKIYTLFIKSFSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LSETSNKQILSFILVIRMLYDMPHMIDENIDFNFFIESFDSKHIRNFRGYQLRSAYKQED HHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHCC ITPDHIVKFNKINNFINPFYSYFEISSWGEAVVNWLLNLELDENLTKELLERDLVTEETL CCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH MSDRLSSELLAEFHNMEIGPNFAARLYYMACAKIGSAQLNNLSFYCDILESCGELNLAIQ HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCCCEEEEE LENHIKQYINTTITAQENSVFIGDFYFLGKEPNDRFYDYVTEKIEEDRTQNVNPSTILSI EHHHHHHHHCCEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH FNKYHESNRSAYNTTDNQSIRLIDKNILRDIIWSDISTRAGYRKQFVHSILLYPPLNEIE HHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHC GKAEEVRKWILELLDEKIKANPNSEPSIRMWLEDTNNLTKNLR CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHCCC >Mature Secondary Structure ANVFNLSKRLLELINNEDNFAIALVGEWGIGKTHFWNEFYKENHLSFKTKKYAYVSLFG CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEECCEEEEEEEC IDSLESLKFEIALKTHNTGQEKDNLSYLKTGFKKVLENVNFSDIEGSGVTLSVSKGVISS CCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHH TLSSMVNDTVICIDDIERLSDKLDIKDVMGLINHLNLEKNCKIIVLLDQAKAKEQFIEYK HHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHH EKVFDDVLVLDESLSVIQKIVDDKMFDVYKDFYTTTGVKNLRFYQRVNKIYTLFIKSFSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LSETSNKQILSFILVIRMLYDMPHMIDENIDFNFFIESFDSKHIRNFRGYQLRSAYKQED HHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHCC ITPDHIVKFNKINNFINPFYSYFEISSWGEAVVNWLLNLELDENLTKELLERDLVTEETL CCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH MSDRLSSELLAEFHNMEIGPNFAARLYYMACAKIGSAQLNNLSFYCDILESCGELNLAIQ HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCCCEEEEE LENHIKQYINTTITAQENSVFIGDFYFLGKEPNDRFYDYVTEKIEEDRTQNVNPSTILSI EHHHHHHHHCCEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH FNKYHESNRSAYNTTDNQSIRLIDKNILRDIIWSDISTRAGYRKQFVHSILLYPPLNEIE HHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHC GKAEEVRKWILELLDEKIKANPNSEPSIRMWLEDTNNLTKNLR CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA