| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is recX [H]
Identifier: 148653779
GI number: 148653779
Start: 2470257
End: 2471492
Strand: Direct
Name: recX [H]
Synonym: PsycPRwf_1982
Alternate gene names: 148653779
Gene position: 2470257-2471492 (Clockwise)
Preceding gene: 148653778
Following gene: 148653781
Centisome position: 82.92
GC content: 47.17
Gene sequence:
>1236_bases ATGCAGATAAAAACCTTAGCTCAGATTTTGGCAGAAAACGAGACTGGTGATAAGAAATCCACTCAACGTCAGTCAAAATC GGGGCAAGCAAAGTCAAAAAACAGCGCGCACCACACAACATCACGGGCACAGACCAGCTCTGCCGGTACTACCAATGATT GTGCGGTAGATACGCTGCAAGATTCTAAGCCGCAGCGGCTTGACGCTAAGCGCTCTAAACTCTCCAAACCCTCACAGCAT TCTAAGGCGGCTAGACCCTCGTACCGCAAACGCTCTTATGCCAAAAAACCAAGCTTAGGAAATAAACCAGACCATACCGA TGAGTTTCATACTGATGTTGGCGGTGATAATCAAGTAGATGTATCACCAGACACTGCACACAAGCTATCGGCTCAGCCTA AACAGCGTAAAAACAAAACATTCCATCCAGCCGCCCCTTATCAGCCAAAAACCCAGCTGGCTGAGCCCATCAAAGAAGTC GACCCCAATAGTATTAAAAGCTTATTGGCACAGGTGAAGGCCGAAGCCCAACAGCAAACAGACGCTCTGGTACCCTTGGC TGAGGCATCGGCATCCACACCGCAGTCCTACTCTGCTGACCCTTCTGCAGATAATGCCCTCATAACCGATGACTTAGGCA TAGACAATCTACCTGCTGCGCTAAAAGCTTACCTAAGAACACCTGAGCAACGTCAAGCAGAAAAAGAGGAGATAAAAGCG GAAAGTCGGCTGCGCTGGTTGGCTTTTTATTATCTGTCTAGACGCGAACACTCTGCAGGAGAGCTGCGCCAAAAATTGCT CGATAAAGAGCAAGACCCAAAAAAAATAGAAGCCCTTTTACAAGAGTTTAAAGATAAAGGCTATCAAAGCGACCACCGCA CAGCGCTCATGCTGATCCGTGAAGGCATTCGTAAGGGCCGCGGCCGTGTTCGGATCAAGAATGACTTTTATAAACGCAAA GTTGAGGTGCCTGCGAACATCGATGAACTGATTGATATGGCAATGGCGGATAACGAAGAGTTTGTCGATGTGTTGTCAGA TAATACATTGGTAGAAGGCGTCGACTGGCTGCGTTTGGCCGTTGAAGCCCGGGTCAAAAAATATGGTGATGAGATTCCCA CTGACCAAAAAATAAAAGCGCGTCAGCTTCGATTCTTGCAATACCGCGGCTTTAAGCCTGATATTTGTTTTGAGGCGATT AAATATAACCTGCAAACACTTGATGAGCGGTTTTAA
Upstream 100 bases:
>100_bases GACGCTTTGATTTAATGGGTAGGTGGCTTTGATAACTATATTAAGCCCCTACCTTTTTATTTAAGGCTATTTACTCTATG AGGTCTTATTAGACAATATT
Downstream 100 bases:
>100_bases AGTCAAATCTGTTGCTGTGATAAGCCAAGCCTTGATGTGTCTAATCGCCTATGGCAGACAGCCTCTTTTCTAGTTCAAGC AATTGTAGCCCCTCAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MQIKTLAQILAENETGDKKSTQRQSKSGQAKSKNSAHHTTSRAQTSSAGTTNDCAVDTLQDSKPQRLDAKRSKLSKPSQH SKAARPSYRKRSYAKKPSLGNKPDHTDEFHTDVGGDNQVDVSPDTAHKLSAQPKQRKNKTFHPAAPYQPKTQLAEPIKEV DPNSIKSLLAQVKAEAQQQTDALVPLAEASASTPQSYSADPSADNALITDDLGIDNLPAALKAYLRTPEQRQAEKEEIKA ESRLRWLAFYYLSRREHSAGELRQKLLDKEQDPKKIEALLQEFKDKGYQSDHRTALMLIREGIRKGRGRVRIKNDFYKRK VEVPANIDELIDMAMADNEEFVDVLSDNTLVEGVDWLRLAVEARVKKYGDEIPTDQKIKARQLRFLQYRGFKPDICFEAI KYNLQTLDERF
Sequences:
>Translated_411_residues MQIKTLAQILAENETGDKKSTQRQSKSGQAKSKNSAHHTTSRAQTSSAGTTNDCAVDTLQDSKPQRLDAKRSKLSKPSQH SKAARPSYRKRSYAKKPSLGNKPDHTDEFHTDVGGDNQVDVSPDTAHKLSAQPKQRKNKTFHPAAPYQPKTQLAEPIKEV DPNSIKSLLAQVKAEAQQQTDALVPLAEASASTPQSYSADPSADNALITDDLGIDNLPAALKAYLRTPEQRQAEKEEIKA ESRLRWLAFYYLSRREHSAGELRQKLLDKEQDPKKIEALLQEFKDKGYQSDHRTALMLIREGIRKGRGRVRIKNDFYKRK VEVPANIDELIDMAMADNEEFVDVLSDNTLVEGVDWLRLAVEARVKKYGDEIPTDQKIKARQLRFLQYRGFKPDICFEAI KYNLQTLDERF >Mature_411_residues MQIKTLAQILAENETGDKKSTQRQSKSGQAKSKNSAHHTTSRAQTSSAGTTNDCAVDTLQDSKPQRLDAKRSKLSKPSQH SKAARPSYRKRSYAKKPSLGNKPDHTDEFHTDVGGDNQVDVSPDTAHKLSAQPKQRKNKTFHPAAPYQPKTQLAEPIKEV DPNSIKSLLAQVKAEAQQQTDALVPLAEASASTPQSYSADPSADNALITDDLGIDNLPAALKAYLRTPEQRQAEKEEIKA ESRLRWLAFYYLSRREHSAGELRQKLLDKEQDPKKIEALLQEFKDKGYQSDHRTALMLIREGIRKGRGRVRIKNDFYKRK VEVPANIDELIDMAMADNEEFVDVLSDNTLVEGVDWLRLAVEARVKKYGDEIPTDQKIKARQLRFLQYRGFKPDICFEAI KYNLQTLDERF
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 46441; Mature: 46441
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKTLAQILAENETGDKKSTQRQSKSGQAKSKNSAHHTTSRAQTSSAGTTNDCAVDTLQ CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHC DSKPQRLDAKRSKLSKPSQHSKAARPSYRKRSYAKKPSLGNKPDHTDEFHTDVGGDNQVD CCCCHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEC VSPDTAHKLSAQPKQRKNKTFHPAAPYQPKTQLAEPIKEVDPNSIKSLLAQVKAEAQQQT CCCCHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH DALVPLAEASASTPQSYSADPSADNALITDDLGIDNLPAALKAYLRTPEQRQAEKEEIKA HHHCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH ESRLRWLAFYYLSRREHSAGELRQKLLDKEQDPKKIEALLQEFKDKGYQSDHRTALMLIR HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH EGIRKGRGRVRIKNDFYKRKVEVPANIDELIDMAMADNEEFVDVLSDNTLVEGVDWLRLA HHHHHCCCCEEECCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHH VEARVKKYGDEIPTDQKIKARQLRFLQYRGFKPDICFEAIKYNLQTLDERF HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQIKTLAQILAENETGDKKSTQRQSKSGQAKSKNSAHHTTSRAQTSSAGTTNDCAVDTLQ CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHC DSKPQRLDAKRSKLSKPSQHSKAARPSYRKRSYAKKPSLGNKPDHTDEFHTDVGGDNQVD CCCCHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEC VSPDTAHKLSAQPKQRKNKTFHPAAPYQPKTQLAEPIKEVDPNSIKSLLAQVKAEAQQQT CCCCHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH DALVPLAEASASTPQSYSADPSADNALITDDLGIDNLPAALKAYLRTPEQRQAEKEEIKA HHHCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH ESRLRWLAFYYLSRREHSAGELRQKLLDKEQDPKKIEALLQEFKDKGYQSDHRTALMLIR HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH EGIRKGRGRVRIKNDFYKRKVEVPANIDELIDMAMADNEEFVDVLSDNTLVEGVDWLRLA HHHHHCCCCEEECCHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHH VEARVKKYGDEIPTDQKIKARQLRFLQYRGFKPDICFEAIKYNLQTLDERF HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA