Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148653628

Identifier: 148653628

GI number: 148653628

Start: 2274962

End: 2275651

Strand: Direct

Name: 148653628

Synonym: PsycPRwf_1831

Alternate gene names: NA

Gene position: 2274962-2275651 (Clockwise)

Preceding gene: 148653627

Following gene: 148653629

Centisome position: 76.37

GC content: 47.39

Gene sequence:

>690_bases
ATGACTCATTTGGTAACAGCCCCAACTCACAAGCAAAGTGATAAGCATCGTGGTCTATCCACTATGCTTATCACTGCTGT
ACTGCTGGGCTCACCGCTTTTGCTCAGCAGTTGCGGCTTTCATCTGCGTGGCTACGATGCACCTATGGCCTACTCAGTGG
GTAGTACAGTGCTTAGTATCAATGAAGATGATATCGTAAGCTTTCGTATCAAGCGCCCCTTAAAGCAGCGCTTGAATGCT
GTGGGTATCAATGTGGTCGATGATATTGGCCGCCAGATCAATAGCAGTAATCAGCTTTATACCTCGACCATTAAGGTCAG
TAACGTACAGCTGAAACGTTATGAGCTGGTCGGGGTACTGACCGAGGTACGTCTGGTGTTATCAGCCGATGTCATCTACG
AGACCTTGAATAATAGCGATGGCGCTTCAAGCGCACCCATGATTGTCAAAAACAAGGTGCAGGTAGAGCGTACTTATCAG
TTCGATGAGGCCTCTGTGAGTATTGAGGACAAGCAAGGTGCTCAAATTCAAGATTGGCTGTATGACAACTTATCTCAGCG
TATTGCAGATCAATATGTGGCCTTAAGCCTACCTAGGGTAGCGCCTGAAGCGAGCACTAAACAAAACCCTAAGCCTTTGG
TAGTCGCCCCAAAATCTGATGCTAGTACCAATGCCGAGCTTGTCCCTTAA

Upstream 100 bases:

>100_bases
CAAAGCGATTGAGAGTGTGGCCAAATACTTAACAGGCGACATCAAAAAAGAAATCGTGGTGCCCAATAAGCTGGTCAACA
TTGTAGTGGCAGGTTAACTC

Downstream 100 bases:

>100_bases
GCCATGCAAGATACCTTTTTAAACGTTTATCCTAAGCTTTTGCTACCTAGCAACATCCGGCCCACCGGACTGTGGTTGGG
GCATGGTGATGAGCCCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MTHLVTAPTHKQSDKHRGLSTMLITAVLLGSPLLLSSCGFHLRGYDAPMAYSVGSTVLSINEDDIVSFRIKRPLKQRLNA
VGINVVDDIGRQINSSNQLYTSTIKVSNVQLKRYELVGVLTEVRLVLSADVIYETLNNSDGASSAPMIVKNKVQVERTYQ
FDEASVSIEDKQGAQIQDWLYDNLSQRIADQYVALSLPRVAPEASTKQNPKPLVVAPKSDASTNAELVP

Sequences:

>Translated_229_residues
MTHLVTAPTHKQSDKHRGLSTMLITAVLLGSPLLLSSCGFHLRGYDAPMAYSVGSTVLSINEDDIVSFRIKRPLKQRLNA
VGINVVDDIGRQINSSNQLYTSTIKVSNVQLKRYELVGVLTEVRLVLSADVIYETLNNSDGASSAPMIVKNKVQVERTYQ
FDEASVSIEDKQGAQIQDWLYDNLSQRIADQYVALSLPRVAPEASTKQNPKPLVVAPKSDASTNAELVP
>Mature_228_residues
THLVTAPTHKQSDKHRGLSTMLITAVLLGSPLLLSSCGFHLRGYDAPMAYSVGSTVLSINEDDIVSFRIKRPLKQRLNAV
GINVVDDIGRQINSSNQLYTSTIKVSNVQLKRYELVGVLTEVRLVLSADVIYETLNNSDGASSAPMIVKNKVQVERTYQF
DEASVSIEDKQGAQIQDWLYDNLSQRIADQYVALSLPRVAPEASTKQNPKPLVVAPKSDASTNAELVP

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25123; Mature: 24992

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHLVTAPTHKQSDKHRGLSTMLITAVLLGSPLLLSSCGFHLRGYDAPMAYSVGSTVLSI
CCCEECCCCCCCCHHHCCHHHHHHHHHHHCCCHHHHHCCCEEECCCCCEEEECCCEEEEE
NEDDIVSFRIKRPLKQRLNAVGINVVDDIGRQINSSNQLYTSTIKVSNVQLKRYELVGVL
CCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEECEEEHHHHHHHHH
TEVRLVLSADVIYETLNNSDGASSAPMIVKNKVQVERTYQFDEASVSIEDKQGAQIQDWL
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEEECCCEEEEECCCCCHHHHHH
YDNLSQRIADQYVALSLPRVAPEASTKQNPKPLVVAPKSDASTNAELVP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
THLVTAPTHKQSDKHRGLSTMLITAVLLGSPLLLSSCGFHLRGYDAPMAYSVGSTVLSI
CCEECCCCCCCCHHHCCHHHHHHHHHHHCCCHHHHHCCCEEECCCCCEEEECCCEEEEE
NEDDIVSFRIKRPLKQRLNAVGINVVDDIGRQINSSNQLYTSTIKVSNVQLKRYELVGVL
CCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEECEEEHHHHHHHHH
TEVRLVLSADVIYETLNNSDGASSAPMIVKNKVQVERTYQFDEASVSIEDKQGAQIQDWL
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEEECCCEEEEECCCCCHHHHHH
YDNLSQRIADQYVALSLPRVAPEASTKQNPKPLVVAPKSDASTNAELVP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA