| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is tolQ [H]
Identifier: 148653364
GI number: 148653364
Start: 1923585
End: 1924376
Strand: Direct
Name: tolQ [H]
Synonym: PsycPRwf_1566
Alternate gene names: 148653364
Gene position: 1923585-1924376 (Clockwise)
Preceding gene: 148653356
Following gene: 148653365
Centisome position: 64.57
GC content: 47.47
Gene sequence:
>792_bases ATGCTAACCCCCTTTTATCTTGAGTTTTTTATTACAGCGAGTATTTCATTCATGCCAGAGTCTATCAATCTTATTGCCCT CATTACCGAGGCCAGTTTACTGGTTCAAATCGTCATGGCTATTTTGCTGTTGGCGTCCGTTATCTGCTGGGTATTAATTT TTCGCTTAAGTGCCCGATTGGGGACTGCTAAGCGTCAAGACCAGCATTTTGAAAACTGGTTTTGGTCCGGTGAAGACCTC TCTAAGCTGTATCAGGGGATCCAAAATTCACCAGACAGACATGGTTTGGCCAATATCTTTTATGTGGGTTTCTCTGAATT TTTGCGTATGAATAAAAAGCGTCAGCCTAAAGACCACATTATTGACGGTGTTGAGCGTAAGCTACGTGTCGGCTTAGGTC GTCAGCAGCAGTCCTTAGAGTCAGGCCTTGCGGTACTTGCCAGCATCGGCTCAGTCTCCCCTTATATTGGACTATTTGGT ACGGTCTGGGGGATCATGAATGCTTTTTTGGGTCTGGCTCAGGTAGAACAAGTCAGCTTATCGGCTGTCGCACCAGGTAT CGCTGAGGCCCTCATTGCCACCGCGATGGGATTATTTGCTGCCATCCCTGCGGTATTGGCTTACAACCATTTTACTGCCA AAGCTGCGGGCATCTATGACAGCCGCGCCTTATTTTGTGATGAGATGACCGGTATGTTACAGCGTGAAACCTATGAGACC GGCGCAGCGCCTGTCGCAAGCTCAAACGACGTACCCACAGCGGCTCAAAATATTCAATCCCCTTTGGTATAA
Upstream 100 bases:
>100_bases AGCTTTGAGCTGCAATTTATGCCGGTACCATAAAATCTATTAACAATACCTTTAAGTATGCGACACTATACTGCATAATC TGCAATATTGGGTTATGTCG
Downstream 100 bases:
>100_bases AAGGAGCATTTTATGAAAGCCAGCCCCTTTTCTCGCCATAAAAAAGAGCTCAATGCCAGCATGAACGTCGTGCCTTATAT CGATGTGATGCTGGTGCTTT
Product: Tol-Pal system, TolQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLTPFYLEFFITASISFMPESINLIALITEASLLVQIVMAILLLASVICWVLIFRLSARLGTAKRQDQHFENWFWSGEDL SKLYQGIQNSPDRHGLANIFYVGFSEFLRMNKKRQPKDHIIDGVERKLRVGLGRQQQSLESGLAVLASIGSVSPYIGLFG TVWGIMNAFLGLAQVEQVSLSAVAPGIAEALIATAMGLFAAIPAVLAYNHFTAKAAGIYDSRALFCDEMTGMLQRETYET GAAPVASSNDVPTAAQNIQSPLV
Sequences:
>Translated_263_residues MLTPFYLEFFITASISFMPESINLIALITEASLLVQIVMAILLLASVICWVLIFRLSARLGTAKRQDQHFENWFWSGEDL SKLYQGIQNSPDRHGLANIFYVGFSEFLRMNKKRQPKDHIIDGVERKLRVGLGRQQQSLESGLAVLASIGSVSPYIGLFG TVWGIMNAFLGLAQVEQVSLSAVAPGIAEALIATAMGLFAAIPAVLAYNHFTAKAAGIYDSRALFCDEMTGMLQRETYET GAAPVASSNDVPTAAQNIQSPLV >Mature_263_residues MLTPFYLEFFITASISFMPESINLIALITEASLLVQIVMAILLLASVICWVLIFRLSARLGTAKRQDQHFENWFWSGEDL SKLYQGIQNSPDRHGLANIFYVGFSEFLRMNKKRQPKDHIIDGVERKLRVGLGRQQQSLESGLAVLASIGSVSPYIGLFG TVWGIMNAFLGLAQVEQVSLSAVAPGIAEALIATAMGLFAAIPAVLAYNHFTAKAAGIYDSRALFCDEMTGMLQRETYET GAAPVASSNDVPTAAQNIQSPLV
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=220, Percent_Identity=44.0909090909091, Blast_Score=183, Evalue=1e-47, Organism=Escherichia coli, GI1789381, Length=206, Percent_Identity=34.4660194174757, Blast_Score=114, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 28722; Mature: 28722
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTPFYLEFFITASISFMPESINLIALITEASLLVQIVMAILLLASVICWVLIFRLSARL CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTAKRQDQHFENWFWSGEDLSKLYQGIQNSPDRHGLANIFYVGFSEFLRMNKKRQPKDHI CCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH IDGVERKLRVGLGRQQQSLESGLAVLASIGSVSPYIGLFGTVWGIMNAFLGLAQVEQVSL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SAVAPGIAEALIATAMGLFAAIPAVLAYNHFTAKAAGIYDSRALFCDEMTGMLQRETYET HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC GAAPVASSNDVPTAAQNIQSPLV CCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MLTPFYLEFFITASISFMPESINLIALITEASLLVQIVMAILLLASVICWVLIFRLSARL CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTAKRQDQHFENWFWSGEDLSKLYQGIQNSPDRHGLANIFYVGFSEFLRMNKKRQPKDHI CCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH IDGVERKLRVGLGRQQQSLESGLAVLASIGSVSPYIGLFGTVWGIMNAFLGLAQVEQVSL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SAVAPGIAEALIATAMGLFAAIPAVLAYNHFTAKAAGIYDSRALFCDEMTGMLQRETYET HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC GAAPVASSNDVPTAAQNIQSPLV CCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]