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The map label for this gene is ydgI [H]

Identifier: 148653298

GI number: 148653298

Start: 1827959

End: 1829296

Strand: Direct

Name: ydgI [H]

Synonym: PsycPRwf_1498

Alternate gene names: 148653298

Gene position: 1827959-1829296 (Clockwise)

Preceding gene: 148653297

Following gene: 148653299

Centisome position: 61.36

GC content: 47.46

Gene sequence:

>1338_bases
ATGCTAAATGGACAAAAAATCGGGTTGGCCATGCTCACTGCCATTGTGTTCAGCTCAATGGTGGGTGCCGGTATCTTTAG
CTTACCGCAGAATATGGCCGAGGTTGTAGGCGCAAATGCCATTATTACCGCTTGGCTTATCACCGGTGTGGGTATCTTAT
TTCTCGCCGGCTGTTTTTTGCACTTATCACGTCTTAAGCCCGAGCTTGATGGCGGTATTTATACTTATGCCAAAACCGGC
TTTGGCGATTTGGCAGGTTTCTTTTCGGCCTGGGGATACTGGCTGTGTGCCACCATTGGCGTGGTGGGCTATTTGGTAGT
CGCATTTGCCGCTTTGGGTAGTTTTGTTGATACCCCCAATCAGGTTATCTTTGGGGAGGGCAATACCTTATGGGCCTTAT
TGGGTGAGTCTTTTATCTTGTGGCTGGTACACTACCTGGTGCTGCGCGGTGTCAAACAAGCGGCCTTTATTAACTTGCTA
GCAACTTTGGCAAAAAGCCTACCGCTTATCGCTTTTATTATATTTGCGTACTATGCATTTGATATTGACACCTTTAATAC
TGATCGTGCTGGCACCAGTTTAGAGGTGCCTTTTATGGATCAGGTCAAAAGCACCATGCTGATCACTTTATGGGTGTTTA
CCGGTATTGAAGGGGCCACTGTGCTATCACAGCGGGCCAAAAGGCGCGCTGATATCGGGCGGGCTACTTATATTGGTGTG
ATCTTAGCATTGGTGATATATATTGCCATTACCCTACTTTCGCTAGGGGTTATGAGCCGGGCCGATGTTGCGGCTCTAAG
TAACCCGTCAATGGCGGGTATCATGGCGCATATGACAGGCAGTTTGGGCAAATGGGCCATTAGTATTGGCCTTGTTATCT
CCGTATTAGCCTCTTATTTGAGCTGGATTTTGTATTCGGCTGAAGTGCCCTATACCGCAGCTAAATACCAGGCTTTCCCG
CGTATTTTCACCAAACAAAATGCGCAAGGCACACCCACTGCCTCATTGATGCTCACCAGCTTCACTGTGCAGCTGTGTCT
ATTAATGATATTTTTGACAGGCGAAGGCTACAACCTATTGGTGCGCATCTCAACCTCTATGATTCTGATACCCTACTTTT
TGGTCGGAGCCTATTTGGTTAAGCTATCTTTTGCCCAATCAGAGCGGTGGCATATCAAGGCGGTGGGGCTAGGCGCCATT
ATATATGGTGTTTGGCTAATTTATGCCGCGGGCATTGATAACCTATTGCTGTCACTATTATTGTATGCACCTGGCCTGAT
GATTCTTTATTATAGCCGCTATCAGGCACACCAGCAGACACTACAGCCCCCATCTTAG

Upstream 100 bases:

>100_bases
GGGGTTTCACTAATTGGCGGCGGCTGTGGTATTGGCCCTGAGCATATTAATGAGCTAAGCGGCTACTTCACCAAGGCGGG
CACGACACAGAGATAACACG

Downstream 100 bases:

>100_bases
ACGGTGTTTGCGCCTGTTTTAATAGGTGATAAATCTAAAGAGTGAGCAATGGTAGCAAAAAGCCCCTTTAATTTAGGGGC
TTAACTTGTTATCTTGTCAT

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MLNGQKIGLAMLTAIVFSSMVGAGIFSLPQNMAEVVGANAIITAWLITGVGILFLAGCFLHLSRLKPELDGGIYTYAKTG
FGDLAGFFSAWGYWLCATIGVVGYLVVAFAALGSFVDTPNQVIFGEGNTLWALLGESFILWLVHYLVLRGVKQAAFINLL
ATLAKSLPLIAFIIFAYYAFDIDTFNTDRAGTSLEVPFMDQVKSTMLITLWVFTGIEGATVLSQRAKRRADIGRATYIGV
ILALVIYIAITLLSLGVMSRADVAALSNPSMAGIMAHMTGSLGKWAISIGLVISVLASYLSWILYSAEVPYTAAKYQAFP
RIFTKQNAQGTPTASLMLTSFTVQLCLLMIFLTGEGYNLLVRISTSMILIPYFLVGAYLVKLSFAQSERWHIKAVGLGAI
IYGVWLIYAAGIDNLLLSLLLYAPGLMILYYSRYQAHQQTLQPPS

Sequences:

>Translated_445_residues
MLNGQKIGLAMLTAIVFSSMVGAGIFSLPQNMAEVVGANAIITAWLITGVGILFLAGCFLHLSRLKPELDGGIYTYAKTG
FGDLAGFFSAWGYWLCATIGVVGYLVVAFAALGSFVDTPNQVIFGEGNTLWALLGESFILWLVHYLVLRGVKQAAFINLL
ATLAKSLPLIAFIIFAYYAFDIDTFNTDRAGTSLEVPFMDQVKSTMLITLWVFTGIEGATVLSQRAKRRADIGRATYIGV
ILALVIYIAITLLSLGVMSRADVAALSNPSMAGIMAHMTGSLGKWAISIGLVISVLASYLSWILYSAEVPYTAAKYQAFP
RIFTKQNAQGTPTASLMLTSFTVQLCLLMIFLTGEGYNLLVRISTSMILIPYFLVGAYLVKLSFAQSERWHIKAVGLGAI
IYGVWLIYAAGIDNLLLSLLLYAPGLMILYYSRYQAHQQTLQPPS
>Mature_445_residues
MLNGQKIGLAMLTAIVFSSMVGAGIFSLPQNMAEVVGANAIITAWLITGVGILFLAGCFLHLSRLKPELDGGIYTYAKTG
FGDLAGFFSAWGYWLCATIGVVGYLVVAFAALGSFVDTPNQVIFGEGNTLWALLGESFILWLVHYLVLRGVKQAAFINLL
ATLAKSLPLIAFIIFAYYAFDIDTFNTDRAGTSLEVPFMDQVKSTMLITLWVFTGIEGATVLSQRAKRRADIGRATYIGV
ILALVIYIAITLLSLGVMSRADVAALSNPSMAGIMAHMTGSLGKWAISIGLVISVLASYLSWILYSAEVPYTAAKYQAFP
RIFTKQNAQGTPTASLMLTSFTVQLCLLMIFLTGEGYNLLVRISTSMILIPYFLVGAYLVKLSFAQSERWHIKAVGLGAI
IYGVWLIYAAGIDNLLLSLLLYAPGLMILYYSRYQAHQQTLQPPS

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=439, Percent_Identity=55.3530751708428, Blast_Score=487, Evalue=1e-139,
Organism=Escherichia coli, GI2367353, Length=455, Percent_Identity=27.032967032967, Blast_Score=125, Evalue=8e-30,
Organism=Escherichia coli, GI1786908, Length=392, Percent_Identity=27.0408163265306, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1790575, Length=401, Percent_Identity=24.9376558603491, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004754 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48305; Mature: 48305

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNGQKIGLAMLTAIVFSSMVGAGIFSLPQNMAEVVGANAIITAWLITGVGILFLAGCFL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
HLSRLKPELDGGIYTYAKTGFGDLAGFFSAWGYWLCATIGVVGYLVVAFAALGSFVDTPN
HHHHCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QVIFGEGNTLWALLGESFILWLVHYLVLRGVKQAAFINLLATLAKSLPLIAFIIFAYYAF
CEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIDTFNTDRAGTSLEVPFMDQVKSTMLITLWVFTGIEGATVLSQRAKRRADIGRATYIGV
CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH
ILALVIYIAITLLSLGVMSRADVAALSNPSMAGIMAHMTGSLGKWAISIGLVISVLASYL
HHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SWILYSAEVPYTAAKYQAFPRIFTKQNAQGTPTASLMLTSFTVQLCLLMIFLTGEGYNLL
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VRISTSMILIPYFLVGAYLVKLSFAQSERWHIKAVGLGAIIYGVWLIYAAGIDNLLLSLL
EEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCHHHHHHHHH
LYAPGLMILYYSRYQAHQQTLQPPS
HHCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLNGQKIGLAMLTAIVFSSMVGAGIFSLPQNMAEVVGANAIITAWLITGVGILFLAGCFL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
HLSRLKPELDGGIYTYAKTGFGDLAGFFSAWGYWLCATIGVVGYLVVAFAALGSFVDTPN
HHHHCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QVIFGEGNTLWALLGESFILWLVHYLVLRGVKQAAFINLLATLAKSLPLIAFIIFAYYAF
CEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIDTFNTDRAGTSLEVPFMDQVKSTMLITLWVFTGIEGATVLSQRAKRRADIGRATYIGV
CCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH
ILALVIYIAITLLSLGVMSRADVAALSNPSMAGIMAHMTGSLGKWAISIGLVISVLASYL
HHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SWILYSAEVPYTAAKYQAFPRIFTKQNAQGTPTASLMLTSFTVQLCLLMIFLTGEGYNLL
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VRISTSMILIPYFLVGAYLVKLSFAQSERWHIKAVGLGAIIYGVWLIYAAGIDNLLLSLL
EEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCHHHHHHHHH
LYAPGLMILYYSRYQAHQQTLQPPS
HHCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]