Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148653265

Identifier: 148653265

GI number: 148653265

Start: 1794867

End: 1795997

Strand: Direct

Name: 148653265

Synonym: PsycPRwf_1463

Alternate gene names: NA

Gene position: 1794867-1795997 (Clockwise)

Preceding gene: 148653264

Following gene: 148653266

Centisome position: 60.25

GC content: 43.15

Gene sequence:

>1131_bases
ATGAAAAAGATCGTTGCTCCTCTTGCCTTGTTTTATTTTTGTTGCCCTGCCGCTTATGCAGAAGCGCCCAAGCTATTCGG
CAACTTGTTTGTACAAGGCTATTATTCTGACGCAAACTTTGATGCAGATAAAAAGCAGTTAGCAGATAAGTATCCTACCT
ACCAAGGCAGTGGTAAATACGGAGAAGATGACTTTCATATCAAAACTTATAAATCAACAATAGGTCTTCGAGGTTCAGAG
CCTATTAGTGCGACCACAGACGTGGTTTACCAGTTTCAATTTGGTGTGAATTTGACCGAAAGTAATGGCTCAAGTGTTGA
TTTGCCCAATCGTAGTAACTATTTAGGCTTAAAAAATGATACATGGGGCACAATAAGAGCCGGTCGCTACTGGACCCCTG
TGGATTTGATTAACAATGTCGTTGTTGCTAAAGGCATCTGGGACAATAACGGCACGACTCAATTGTCAAAAACCACACAA
TCTGTTAACGCACTAAACATGACCGATGCCGTACCTCGGGTATCTAATGTCCTCTTCTGGCAGTCACCAGAGCGTAAGGA
TTTGCCATTTGAGCTGTTTGTGATGTATCAGGCGGATGAGGATAATGAATACCACAATGGCGAAGGCTTTGGCAGCTATC
TCACCTATAAGCCTAATAATGGCTTGGTGGCAAGCGTTGCTTATGACAAGGACCTAGAAATCTCAGGGTCTCTTGTGCGC
GGTACCGCCACCTATGATTTAGCCAAATCCACTAACGTGCCTGTTACGTTAGGCGCCTTATACCAAGTGGCTGATTATGA
CGGCTACTCAGAAAAAGAAAAAGGCATGGTACTTAGTGCAAAGCTCGGCTTAAGCAACTTCGCAAGACCTGCCTCAGTAT
ATGCTCAGTACAATAGAAGTACTGATTTACATGGTATCTCTGGCGCAGACTCTAATCAGATTGCGATCGGTGGTGAATAT
AACTTTAAAGATAACGTCATTGCCCATGCTTATATGGGTTATAACAAGGCAAAAGATGTGGAAGGATATCTTGGCACACA
AGAGGATGCCAATGGTGAATTAACCCCTCTGTATGCCAAAGGTGACTCAGATTATTTTGCTATTGGCACAGGTCTTCAAT
ACAAGTTCTAG

Upstream 100 bases:

>100_bases
TATGGATAAATATCTGTAATATAAACTCTACATTAATTGACATATGTCACCAAATTTTGGCCATCTCTGCTGATTCTTAC
TTCAATAAAGAGTTTTATTT

Downstream 100 bases:

>100_bases
TCCGCCGCTCTTAGCGCTTATTCATATAGATTAGGTTAATGTAAAATCTAAGGCTGTTGGCCAACAAAGTCACAAATGGC
CCTAAAAACTGTCTTATGTT

Product: porin

Products: NA

Alternate protein names: Outer Membrane Porin M

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKKIVAPLALFYFCCPAAYAEAPKLFGNLFVQGYYSDANFDADKKQLADKYPTYQGSGKYGEDDFHIKTYKSTIGLRGSE
PISATTDVVYQFQFGVNLTESNGSSVDLPNRSNYLGLKNDTWGTIRAGRYWTPVDLINNVVVAKGIWDNNGTTQLSKTTQ
SVNALNMTDAVPRVSNVLFWQSPERKDLPFELFVMYQADEDNEYHNGEGFGSYLTYKPNNGLVASVAYDKDLEISGSLVR
GTATYDLAKSTNVPVTLGALYQVADYDGYSEKEKGMVLSAKLGLSNFARPASVYAQYNRSTDLHGISGADSNQIAIGGEY
NFKDNVIAHAYMGYNKAKDVEGYLGTQEDANGELTPLYAKGDSDYFAIGTGLQYKF

Sequences:

>Translated_376_residues
MKKIVAPLALFYFCCPAAYAEAPKLFGNLFVQGYYSDANFDADKKQLADKYPTYQGSGKYGEDDFHIKTYKSTIGLRGSE
PISATTDVVYQFQFGVNLTESNGSSVDLPNRSNYLGLKNDTWGTIRAGRYWTPVDLINNVVVAKGIWDNNGTTQLSKTTQ
SVNALNMTDAVPRVSNVLFWQSPERKDLPFELFVMYQADEDNEYHNGEGFGSYLTYKPNNGLVASVAYDKDLEISGSLVR
GTATYDLAKSTNVPVTLGALYQVADYDGYSEKEKGMVLSAKLGLSNFARPASVYAQYNRSTDLHGISGADSNQIAIGGEY
NFKDNVIAHAYMGYNKAKDVEGYLGTQEDANGELTPLYAKGDSDYFAIGTGLQYKF
>Mature_376_residues
MKKIVAPLALFYFCCPAAYAEAPKLFGNLFVQGYYSDANFDADKKQLADKYPTYQGSGKYGEDDFHIKTYKSTIGLRGSE
PISATTDVVYQFQFGVNLTESNGSSVDLPNRSNYLGLKNDTWGTIRAGRYWTPVDLINNVVVAKGIWDNNGTTQLSKTTQ
SVNALNMTDAVPRVSNVLFWQSPERKDLPFELFVMYQADEDNEYHNGEGFGSYLTYKPNNGLVASVAYDKDLEISGSLVR
GTATYDLAKSTNVPVTLGALYQVADYDGYSEKEKGMVLSAKLGLSNFARPASVYAQYNRSTDLHGISGADSNQIAIGGEY
NFKDNVIAHAYMGYNKAKDVEGYLGTQEDANGELTPLYAKGDSDYFAIGTGLQYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41425; Mature: 41425

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVAPLALFYFCCPAAYAEAPKLFGNLFVQGYYSDANFDADKKQLADKYPTYQGSGKY
CCHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCC
GEDDFHIKTYKSTIGLRGSEPISATTDVVYQFQFGVNLTESNGSSVDLPNRSNYLGLKND
CCCCEEEEEEEHCCCCCCCCCCCCCEEEEEEEEECEEEECCCCCEEECCCCCCEEECCCC
TWGTIRAGRYWTPVDLINNVVVAKGIWDNNGTTQLSKTTQSVNALNMTDAVPRVSNVLFW
CCEEEECCCEECHHHHHCCEEEEEEEECCCCCEEEHHHHHHCCEECHHHHHHHHHCEEEE
QSPERKDLPFELFVMYQADEDNEYHNGEGFGSYLTYKPNNGLVASVAYDKDLEISGSLVR
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEECCEEEE
GTATYDLAKSTNVPVTLGALYQVADYDGYSEKEKGMVLSAKLGLSNFARPASVYAQYNRS
CEEEEEECCCCCCCEEHHHEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHEEECCC
TDLHGISGADSNQIAIGGEYNFKDNVIAHAYMGYNKAKDVEGYLGTQEDANGELTPLYAK
CCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEC
GDSDYFAIGTGLQYKF
CCCCEEEEECCEEECC
>Mature Secondary Structure
MKKIVAPLALFYFCCPAAYAEAPKLFGNLFVQGYYSDANFDADKKQLADKYPTYQGSGKY
CCHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCC
GEDDFHIKTYKSTIGLRGSEPISATTDVVYQFQFGVNLTESNGSSVDLPNRSNYLGLKND
CCCCEEEEEEEHCCCCCCCCCCCCCEEEEEEEEECEEEECCCCCEEECCCCCCEEECCCC
TWGTIRAGRYWTPVDLINNVVVAKGIWDNNGTTQLSKTTQSVNALNMTDAVPRVSNVLFW
CCEEEECCCEECHHHHHCCEEEEEEEECCCCCEEEHHHHHHCCEECHHHHHHHHHCEEEE
QSPERKDLPFELFVMYQADEDNEYHNGEGFGSYLTYKPNNGLVASVAYDKDLEISGSLVR
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEECCEEEE
GTATYDLAKSTNVPVTLGALYQVADYDGYSEKEKGMVLSAKLGLSNFARPASVYAQYNRS
CEEEEEECCCCCCCEEHHHEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHEEECCC
TDLHGISGADSNQIAIGGEYNFKDNVIAHAYMGYNKAKDVEGYLGTQEDANGELTPLYAK
CCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEC
GDSDYFAIGTGLQYKF
CCCCEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA