| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is 148653229
Identifier: 148653229
GI number: 148653229
Start: 1750571
End: 1750900
Strand: Direct
Name: 148653229
Synonym: PsycPRwf_1427
Alternate gene names: NA
Gene position: 1750571-1750900 (Clockwise)
Preceding gene: 148653225
Following gene: 148653231
Centisome position: 58.76
GC content: 44.55
Gene sequence:
>330_bases ATGAGTAGAGACTTTACTAAGGCAAAAGAGCGCTTATTAGAGCTGCAACAAGAATATCAAAACCGCATCGATAAGATTGA AGACCACATTCACAATCCGCAAGATGACTTAAACAGCCACTGGGATGACCAAGCCATCTCTATGCGTGAAAACGAAATGC GCAAAACCTTATTGGTAGAGGCTCAGCAAAGCTTAACTTACGTCAATAACGCCCTAAGCCGTATCGACAATGGCACTTAT GGTGAATGTACGGTTTGTGGCGAAGATATCGAGGACAAAAGACTTGAGGCTGTGCCCTACGCTACGCTTTGTATGCAACA CGCCTCTTAG
Upstream 100 bases:
>100_bases CTTGAAACAGGCGCTTTTAAAGACTTATTAGACAATAAGTGCTACTATAATAAGTATAAATAATAAATCATAAATCTACC CTAATTTAAGGAGAGCACCC
Downstream 100 bases:
>100_bases GCTTACGGTTTCCATAATAAACCAAGTAATACAAAAAAAGATTGCCCTACTAAGTAGAGCAATCTTTTTTTGTAAAGCAG CCAGTGATCATCATCAACCA
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TraR/DksA Family; DNAK Suppressor Protein
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSRDFTKAKERLLELQQEYQNRIDKIEDHIHNPQDDLNSHWDDQAISMRENEMRKTLLVEAQQSLTYVNNALSRIDNGTY GECTVCGEDIEDKRLEAVPYATLCMQHAS
Sequences:
>Translated_109_residues MSRDFTKAKERLLELQQEYQNRIDKIEDHIHNPQDDLNSHWDDQAISMRENEMRKTLLVEAQQSLTYVNNALSRIDNGTY GECTVCGEDIEDKRLEAVPYATLCMQHAS >Mature_108_residues SRDFTKAKERLLELQQEYQNRIDKIEDHIHNPQDDLNSHWDDQAISMRENEMRKTLLVEAQQSLTYVNNALSRIDNGTYG ECTVCGEDIEDKRLEAVPYATLCMQHAS
Specific function: Unknown
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12715; Mature: 12584
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDFTKAKERLLELQQEYQNRIDKIEDHIHNPQDDLNSHWDDQAISMRENEMRKTLLVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH AQQSLTYVNNALSRIDNGTYGECTVCGEDIEDKRLEAVPYATLCMQHAS HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHCHHHHHHHHCCC >Mature Secondary Structure SRDFTKAKERLLELQQEYQNRIDKIEDHIHNPQDDLNSHWDDQAISMRENEMRKTLLVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH AQQSLTYVNNALSRIDNGTYGECTVCGEDIEDKRLEAVPYATLCMQHAS HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA