| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653172
Identifier: 148653172
GI number: 148653172
Start: 1680291
End: 1680614
Strand: Direct
Name: 148653172
Synonym: PsycPRwf_1370
Alternate gene names: NA
Gene position: 1680291-1680614 (Clockwise)
Preceding gene: 148653171
Following gene: 148653173
Centisome position: 56.4
GC content: 42.28
Gene sequence:
>324_bases ATGGCCACACGTACCCGCAAAAAAACCACGCCAAAAACATTTAAAGAAGCCTATCAAATTCTAAAGATTAATGCCGAAGA GCTGCAAAACTCAAATGAGCCCGATATTGATAATCTGATGAATACCGTAGAGCAATCTATCGCCGCTTATAAAGTATGCC AAGCACGCATTGAAGCGGTACAGCAAGCACTTGATGCAGCCTTTGATGAAGATGGGACAACCGCTGATTTGCAAAAAAAT GCAGACCCTGCTTTAAAGCCGGATGCAAAGACAAACTCAGCTCAAGAGATACAGACTCAAGTTTCTGAGGAAGATGCTGA ATAA
Upstream 100 bases:
>100_bases GTTGAATCTGACCAAAGCTAATTGATGCTTATTGACTCTTTTGCTCTTATCTTAATGCTTAATATATTGTAAATCTATCA ACCCCTATAAGGACTTTATT
Downstream 100 bases:
>100_bases GGGGCAACGATAAGTGGTGCTTTAACCCTTACATTTATTTTGCCTCAGTTTTTATTGTTTTAACGTGGATTAATCTGCCA TCACTTATTTATTGCAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MATRTRKKTTPKTFKEAYQILKINAEELQNSNEPDIDNLMNTVEQSIAAYKVCQARIEAVQQALDAAFDEDGTTADLQKN ADPALKPDAKTNSAQEIQTQVSEEDAE
Sequences:
>Translated_107_residues MATRTRKKTTPKTFKEAYQILKINAEELQNSNEPDIDNLMNTVEQSIAAYKVCQARIEAVQQALDAAFDEDGTTADLQKN ADPALKPDAKTNSAQEIQTQVSEEDAE >Mature_106_residues ATRTRKKTTPKTFKEAYQILKINAEELQNSNEPDIDNLMNTVEQSIAAYKVCQARIEAVQQALDAAFDEDGTTADLQKNA DPALKPDAKTNSAQEIQTQVSEEDAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11859; Mature: 11728
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRTRKKTTPKTFKEAYQILKINAEELQNSNEPDIDNLMNTVEQSIAAYKVCQARIEAV CCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQALDAAFDEDGTTADLQKNADPALKPDAKTNSAQEIQTQVSEEDAE HHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure ATRTRKKTTPKTFKEAYQILKINAEELQNSNEPDIDNLMNTVEQSIAAYKVCQARIEAV CCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQALDAAFDEDGTTADLQKNADPALKPDAKTNSAQEIQTQVSEEDAE HHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA