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The map label for this gene is insF1 [C]

Identifier: 148653160

GI number: 148653160

Start: 1652166

End: 1652792

Strand: Direct

Name: insF1 [C]

Synonym: PsycPRwf_1358

Alternate gene names: 148653160

Gene position: 1652166-1652792 (Clockwise)

Preceding gene: 148653157

Following gene: 148653162

Centisome position: 55.46

GC content: 42.74

Gene sequence:

>627_bases
ATGGTTCGGCAAATCAAGCAAGAACATGGTATTTACTGCAAACGCCACAAGCGATCTAAGGTGACTACTGACTCAAATCA
TAATAAGCCTGTGTATCCAAACTTGTTAGAACAGCAGTTTGACGTGGCAGCACCCAATATCGCTTGGGTTAGCGATATTA
CCTATATTTGGACCAATGAAGGCTGGGTGTACTTGGCAGCGTTCAAAGACTTGTACAGCAAAGAGATTGTGGGATATGCT
CTAAATAAGCGTATGACCGCTGATTTGGTTTGTGAGGCTTTAAACAATGCCATTAAGTACAAACGCCCTGCTCGGGGCTT
AATCGTGCATTCTGACAGGGGTAGTCAGTATTGTAGCCATCAATACCGCCAAATCATCGACAAGTATGGTTTTGCTGGCT
CTATGAGCCGAAAAGGCAATTGCTACGATAACGCCCCGATTGAAAGCTTCTGGGGTCAGTTAAAAAACGAGCTGATTTAT
CACAAAGTCTATGAGACTCGTGATGAAGCCATTAAGGATGTGGTTAGATATATTGAGATTTTTTACAACCGTCAACGAAT
ACAAAAAGGGTTAGGATTTAAGTCACCTACTCAAGTATTCCAAGACTTTTACCGTCAGGCTGCCTGA

Upstream 100 bases:

>100_bases
TTTAGGATTCTAGTTTACCAAATATTTTTGTCCGTTTTTTTCAGCATACATCAGCTTGCATCAGCATTTAACCAGCCAAG
GACACGACATCAGCCTGTAC

Downstream 100 bases:

>100_bases
TGAAATCTACCAAATGTTTTTCTCCGTTGTTGACAGCAGAGGTCAAGCAGTTATCCTTCTTTCTATCTCAGTTAGTAGAT
TAGAACCAATGCCATTTTGA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MVRQIKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAAPNIAWVSDITYIWTNEGWVYLAAFKDLYSKEIVGYA
LNKRMTADLVCEALNNAIKYKRPARGLIVHSDRGSQYCSHQYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIY
HKVYETRDEAIKDVVRYIEIFYNRQRIQKGLGFKSPTQVFQDFYRQAA

Sequences:

>Translated_208_residues
MVRQIKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAAPNIAWVSDITYIWTNEGWVYLAAFKDLYSKEIVGYA
LNKRMTADLVCEALNNAIKYKRPARGLIVHSDRGSQYCSHQYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIY
HKVYETRDEAIKDVVRYIEIFYNRQRIQKGLGFKSPTQVFQDFYRQAA
>Mature_208_residues
MVRQIKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAAPNIAWVSDITYIWTNEGWVYLAAFKDLYSKEIVGYA
LNKRMTADLVCEALNNAIKYKRPARGLIVHSDRGSQYCSHQYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIY
HKVYETRDEAIKDVVRYIEIFYNRQRIQKGLGFKSPTQVFQDFYRQAA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=173, Percent_Identity=33.5260115606936, Blast_Score=103, Evalue=1e-22,
Organism=Escherichia coli, GI1788405, Length=192, Percent_Identity=42.1875, Blast_Score=162, Evalue=1e-41,
Organism=Escherichia coli, GI1787263, Length=192, Percent_Identity=42.1875, Blast_Score=162, Evalue=1e-41,
Organism=Escherichia coli, GI1786753, Length=192, Percent_Identity=42.1875, Blast_Score=162, Evalue=1e-41,
Organism=Escherichia coli, GI1786570, Length=192, Percent_Identity=42.1875, Blast_Score=162, Evalue=1e-41,
Organism=Escherichia coli, GI1786490, Length=192, Percent_Identity=42.1875, Blast_Score=162, Evalue=1e-41,
Organism=Escherichia coli, GI1789981, Length=166, Percent_Identity=37.3493975903614, Blast_Score=120, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 24424; Mature: 24424

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRQIKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAAPNIAWVSDITYIWTNE
CCCHHHHHCCCEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEHHCEEEEEECC
GWVYLAAFKDLYSKEIVGYALNKRMTADLVCEALNNAIKYKRPARGLIVHSDRGSQYCSH
CEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHH
QYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIYHKVYETRDEAIKDVVRYIEI
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYNRQRIQKGLGFKSPTQVFQDFYRQAA
HHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVRQIKQEHGIYCKRHKRSKVTTDSNHNKPVYPNLLEQQFDVAAPNIAWVSDITYIWTNE
CCCHHHHHCCCEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEHHCEEEEEECC
GWVYLAAFKDLYSKEIVGYALNKRMTADLVCEALNNAIKYKRPARGLIVHSDRGSQYCSH
CEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHH
QYRQIIDKYGFAGSMSRKGNCYDNAPIESFWGQLKNELIYHKVYETRDEAIKDVVRYIEI
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYNRQRIQKGLGFKSPTQVFQDFYRQAA
HHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]