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The map label for this gene is ycaC [H]

Identifier: 148653038

GI number: 148653038

Start: 1518685

End: 1519392

Strand: Direct

Name: ycaC [H]

Synonym: PsycPRwf_1233

Alternate gene names: 148653038

Gene position: 1518685-1519392 (Clockwise)

Preceding gene: 148653037

Following gene: 148653039

Centisome position: 50.98

GC content: 41.67

Gene sequence:

>708_bases
ATGTCTACTTCATCTAAAGCATTATTAGAACTTTTAACGCCAGAAAATTGCCAAGTAATCTTTATTGACCAACAACCACA
AATGGCATTTGGCGTACAGTCTATCGACCGTCAAACTCTTAAAAACAATGTTGTTGGTTTAGCCAAAGCTGCTAAAGTTT
TCAATATTCCTACTACTATTACTACTGTTGAGACAGCCAGCTTCTCTGGTAACACCTTACCAGAACTATTAGAAGTGTTC
CCAGATAACGATCTTCTTGAGCGTAGCTCAATGAACTCTTGGGATGACCAAAATGTTCGTGATGCTTTAGCCGAAAATGC
TAAAAATGGCCGTAAAAAAATTGTTGTGTCAGGCCTATGGACTGAAGTATGTAACCTATCTTTCGCTCTTTCTTGCTTAC
AAGATACTGATTATGAAATCTATATGGTAGCTGACGCTTCTGGTGGTACTACTGTAGAAGCACATCAGTGGGCTATGGAG
CGTATGCTTCAAGTAGGCGTTGTTCCTGTAACTTGGCAGCAAGTGCTTCTTGAGTGGCAACGTGACTGGGCTAATAAAGC
AACTTATGATGCTGTAATGGACATCGTACGTGAGCACTCTGGTGCGTATGGTATGGGTGTTGACTATGCCTACACTATGG
TTCATAAAGCGCCTGCGCGTGTTGCAGCTAAAGGTAGCATCGGTCCTAACCCTGCTCCAAAAAAATAA

Upstream 100 bases:

>100_bases
CCAGGATGCCCAGCCACGTTAATTGCTAAAGCATTTATCTAGCAGCTCTGTAATTAACTCATTTAAATTCTAATTAATCA
TATAAATAGGAATAAAAACT

Downstream 100 bases:

>100_bases
TTAACGATTAAACGTTACCTTTATTTTTAAATAAAAAAGGGCGAACTTAGCTTGTGAACTAACTTAATCCTAGTTATATC
GAGCTCAGTTAGTCCTTTTT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSTSSKALLELLTPENCQVIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKVFNIPTTITTVETASFSGNTLPELLEVF
PDNDLLERSSMNSWDDQNVRDALAENAKNGRKKIVVSGLWTEVCNLSFALSCLQDTDYEIYMVADASGGTTVEAHQWAME
RMLQVGVVPVTWQQVLLEWQRDWANKATYDAVMDIVREHSGAYGMGVDYAYTMVHKAPARVAAKGSIGPNPAPKK

Sequences:

>Translated_235_residues
MSTSSKALLELLTPENCQVIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKVFNIPTTITTVETASFSGNTLPELLEVF
PDNDLLERSSMNSWDDQNVRDALAENAKNGRKKIVVSGLWTEVCNLSFALSCLQDTDYEIYMVADASGGTTVEAHQWAME
RMLQVGVVPVTWQQVLLEWQRDWANKATYDAVMDIVREHSGAYGMGVDYAYTMVHKAPARVAAKGSIGPNPAPKK
>Mature_234_residues
STSSKALLELLTPENCQVIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKVFNIPTTITTVETASFSGNTLPELLEVFP
DNDLLERSSMNSWDDQNVRDALAENAKNGRKKIVVSGLWTEVCNLSFALSCLQDTDYEIYMVADASGGTTVEAHQWAMER
MLQVGVVPVTWQQVLLEWQRDWANKATYDAVMDIVREHSGAYGMGVDYAYTMVHKAPARVAAKGSIGPNPAPKK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=175, Percent_Identity=33.1428571428571, Blast_Score=100, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 25917; Mature: 25785

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSSKALLELLTPENCQVIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKVFNIPTTI
CCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEE
TTVETASFSGNTLPELLEVFPDNDLLERSSMNSWDDQNVRDALAENAKNGRKKIVVSGLW
EEEEECCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHH
TEVCNLSFALSCLQDTDYEIYMVADASGGTTVEAHQWAMERMLQVGVVPVTWQQVLLEWQ
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RDWANKATYDAVMDIVREHSGAYGMGVDYAYTMVHKAPARVAAKGSIGPNPAPKK
HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHEEECCCCCCCCCCCC
>Mature Secondary Structure 
STSSKALLELLTPENCQVIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKVFNIPTTI
CCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEE
TTVETASFSGNTLPELLEVFPDNDLLERSSMNSWDDQNVRDALAENAKNGRKKIVVSGLW
EEEEECCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHH
TEVCNLSFALSCLQDTDYEIYMVADASGGTTVEAHQWAMERMLQVGVVPVTWQQVLLEWQ
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RDWANKATYDAVMDIVREHSGAYGMGVDYAYTMVHKAPARVAAKGSIGPNPAPKK
HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]