Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148653000

Identifier: 148653000

GI number: 148653000

Start: 1459730

End: 1460989

Strand: Direct

Name: 148653000

Synonym: PsycPRwf_1194

Alternate gene names: NA

Gene position: 1459730-1460989 (Clockwise)

Preceding gene: 148652999

Following gene: 148653001

Centisome position: 49.0

GC content: 45.95

Gene sequence:

>1260_bases
ATGAGCACATCTTCGACTCACGCCTCGCCCAAAGACAAAGGCATTAATTGGCAAGCTTTTGGTCCCGGTATCTTACTGGC
CTCAGCAGCCATTGGGGGCTCACATCTTATCTCATCGACACAAGCTGGCGCGTTATATGGTTGGCAATTGGCGATTATGA
TTATCCTCGCCAACTTTTTTAAATATCCCTTTTTTAAATTCGGTACCGACTATGTTTATGAAACCGGAGAGTCGTTGGTT
GCCGGATATGCCAAAAAATCACGCCTATATCTGTGGGCATTTTTTATCTTATCTTTGGCAGCTTCGGTCATTAGCACCGG
TGCAGTGGCGCTATTGGCGGCAGTTATTCTAGGGTTTATGTTGCCTGAAAGCTGGGGGCTATCTAATGGTGTTTTGTCGA
TTATCGTCATGGGCGTGTCTTGGCTATTTTTGATTCTCGGTCACTACAAGATGCTTGATAAGCTTACCAAATGGATTATG
GTGGCGCTGACTGTGACCACGTTAGCTGCGGTGATTATTGCGGCAGGCAAGCCTACCATTATGGCACCAGATTTTGTGGC
CGCCTCACCTTGGAATTTGGCCACCTTGGGCTTTATTGTGGCCTTAATGGGCTGGATGCCGGCACCACTTGAGTTCTCAG
CGATTAATTCTATGTGGATTTCGGCCAAAGTAAAATCGGACCACACCACACACCGTCAGGGCTTAATTGACTTTAATGTC
GGTTTTATCGCCACCTCTTTATTGGCACTGGTATTTTTGGCATTGGGTGTGTTTGTACAGTATGGCTCAGGCGTTGAAAT
CCAGACCCAAGGCGGTGCTTATGTGGGGCAGCTGATTAGTATGTATACGGCCACCATTGGTGAGTGGTCACGTCTATTGG
TAGCATTTGTGGCCTTTATGGTGATGTTTGGTACCACCATTACCTGTGCTGATGGTTATGGCCGTATCAATGCCGAAAGC
TTACGTTTAATCAAAGACGATGCCAATATTTCACAACAGCAAATCATCCTGTGGACCACCTACTGTATTGTGGGCGGCTA
TATTATTATCACCTTCTTTACCGGGCAGCTGGGCGCTATGCTAAAGTTTGCTATGATTACAGCTTTTGTTTCAGCCCCAA
TTTTTGGTTGGTTAAATTACTCACTAGCCAAAGATCAGCAGCACCTATCAGCTGGCATGAAGCTGTACAGTATTGCCGGC
TTGATCTTCTTAGGCGGTATTGCTTTGTTGTTTATGGCGCAATTATTTGGCCTAATCTAA

Upstream 100 bases:

>100_bases
GTAAAAACTTAAATGAATTTAAAAAACACACCTACTGCACCTATGAGTAATCTTATAAACCAAGCCCTTTAAAATAAGCA
CAAATTAAGGTTAACCTGCT

Downstream 100 bases:

>100_bases
AAAAACTTCTCTGTTTAACCTCTTTAAAAGACCTTACAATAGCCGTAAGGTCTTTTTTTATATCCCCTCATATTTAGCTG
GCTTAAGCGCAGGGTTGGAT

Product: manganese transporter NRAMP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSTSSTHASPKDKGINWQAFGPGILLASAAIGGSHLISSTQAGALYGWQLAIMIILANFFKYPFFKFGTDYVYETGESLV
AGYAKKSRLYLWAFFILSLAASVISTGAVALLAAVILGFMLPESWGLSNGVLSIIVMGVSWLFLILGHYKMLDKLTKWIM
VALTVTTLAAVIIAAGKPTIMAPDFVAASPWNLATLGFIVALMGWMPAPLEFSAINSMWISAKVKSDHTTHRQGLIDFNV
GFIATSLLALVFLALGVFVQYGSGVEIQTQGGAYVGQLISMYTATIGEWSRLLVAFVAFMVMFGTTITCADGYGRINAES
LRLIKDDANISQQQIILWTTYCIVGGYIIITFFTGQLGAMLKFAMITAFVSAPIFGWLNYSLAKDQQHLSAGMKLYSIAG
LIFLGGIALLFMAQLFGLI

Sequences:

>Translated_419_residues
MSTSSTHASPKDKGINWQAFGPGILLASAAIGGSHLISSTQAGALYGWQLAIMIILANFFKYPFFKFGTDYVYETGESLV
AGYAKKSRLYLWAFFILSLAASVISTGAVALLAAVILGFMLPESWGLSNGVLSIIVMGVSWLFLILGHYKMLDKLTKWIM
VALTVTTLAAVIIAAGKPTIMAPDFVAASPWNLATLGFIVALMGWMPAPLEFSAINSMWISAKVKSDHTTHRQGLIDFNV
GFIATSLLALVFLALGVFVQYGSGVEIQTQGGAYVGQLISMYTATIGEWSRLLVAFVAFMVMFGTTITCADGYGRINAES
LRLIKDDANISQQQIILWTTYCIVGGYIIITFFTGQLGAMLKFAMITAFVSAPIFGWLNYSLAKDQQHLSAGMKLYSIAG
LIFLGGIALLFMAQLFGLI
>Mature_418_residues
STSSTHASPKDKGINWQAFGPGILLASAAIGGSHLISSTQAGALYGWQLAIMIILANFFKYPFFKFGTDYVYETGESLVA
GYAKKSRLYLWAFFILSLAASVISTGAVALLAAVILGFMLPESWGLSNGVLSIIVMGVSWLFLILGHYKMLDKLTKWIMV
ALTVTTLAAVIIAAGKPTIMAPDFVAASPWNLATLGFIVALMGWMPAPLEFSAINSMWISAKVKSDHTTHRQGLIDFNVG
FIATSLLALVFLALGVFVQYGSGVEIQTQGGAYVGQLISMYTATIGEWSRLLVAFVAFMVMFGTTITCADGYGRINAESL
RLIKDDANISQQQIILWTTYCIVGGYIIITFFTGQLGAMLKFAMITAFVSAPIFGWLNYSLAKDQQHLSAGMKLYSIAGL
IFLGGIALLFMAQLFGLI

Specific function: Unknown

COG id: COG1914

COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45198; Mature: 45067

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSSTHASPKDKGINWQAFGPGILLASAAIGGSHLISSTQAGALYGWQLAIMIILANFF
CCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH
KYPFFKFGTDYVYETGESLVAGYAKKSRLYLWAFFILSLAASVISTGAVALLAAVILGFM
HCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPESWGLSNGVLSIIVMGVSWLFLILGHYKMLDKLTKWIMVALTVTTLAAVIIAAGKPTI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
MAPDFVAASPWNLATLGFIVALMGWMPAPLEFSAINSMWISAKVKSDHTTHRQGLIDFNV
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCEEEEEEECCCCCHHHCCCEEECH
GFIATSLLALVFLALGVFVQYGSGVEIQTQGGAYVGQLISMYTATIGEWSRLLVAFVAFM
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMFGTTITCADGYGRINAESLRLIKDDANISQQQIILWTTYCIVGGYIIITFFTGQLGAM
HHHCCEEEEECCCCCCCHHHHHEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
LKFAMITAFVSAPIFGWLNYSLAKDQQHLSAGMKLYSIAGLIFLGGIALLFMAQLFGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STSSTHASPKDKGINWQAFGPGILLASAAIGGSHLISSTQAGALYGWQLAIMIILANFF
CCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH
KYPFFKFGTDYVYETGESLVAGYAKKSRLYLWAFFILSLAASVISTGAVALLAAVILGFM
HCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPESWGLSNGVLSIIVMGVSWLFLILGHYKMLDKLTKWIMVALTVTTLAAVIIAAGKPTI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
MAPDFVAASPWNLATLGFIVALMGWMPAPLEFSAINSMWISAKVKSDHTTHRQGLIDFNV
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCEEEEEEECCCCCHHHCCCEEECH
GFIATSLLALVFLALGVFVQYGSGVEIQTQGGAYVGQLISMYTATIGEWSRLLVAFVAFM
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMFGTTITCADGYGRINAESLRLIKDDANISQQQIILWTTYCIVGGYIIITFFTGQLGAM
HHHCCEEEEECCCCCCCHHHHHEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
LKFAMITAFVSAPIFGWLNYSLAKDQQHLSAGMKLYSIAGLIFLGGIALLFMAQLFGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]