| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652964
Identifier: 148652964
GI number: 148652964
Start: 1416252
End: 1417511
Strand: Direct
Name: 148652964
Synonym: PsycPRwf_1158
Alternate gene names: NA
Gene position: 1416252-1417511 (Clockwise)
Preceding gene: 148652958
Following gene: 148652965
Centisome position: 47.54
GC content: 48.65
Gene sequence:
>1260_bases ATGCCTGATTTATCTCATCTACTTGCCTCAGTCACGGCCATTGAAAGCTTGCCATTAGCTTTTGGCATCATCATGGCCGT TATTGGCTTGGTTTTTTATACCCAAGGCCTACCGGGCAAATTCTGGCGCAGGTTTTATGCGGTATTACCCGGCATCGTAC TGTGCTGCTTTATTCCTGCTACTTTAAATAGCTTAGGGGTGTTTGCAGAAGGTATTGGCTCGCAAATATATAACTTTACC GCCACTTATTTATTGCCTGCCAGCTTACTGCTGATGACACTGTCGATGGATGTGCCTAAGATTTTGGGATTGGGCTGGAA AGCCATTGCCATGTTCTTTGCAGCAAGCTTTGCCATTATCATCAGTGGGCCGATAAGCTTAGGCATTGCCAAATGGATCT CTCCTGAGATGTTTATGGATGACACTTTATGGCGGGGGTTTTCGGCAGTGGCCGGCAGCTGGATTGGTGGTGCGGCCAAC CAAGCGGCCATGAAGGAGCTGTTTGGGGTCAGTGATGACTTGTTTGGCATGATGATATTGGTTGATACCACCAATGCCTC TTTATGGCTATTGGCTATCTTGGTGATGGCCAAACACAGCGAGAAAATTGATAAGTTTTTGCGTGCAGATACCGGCAGTA TTGAAAAAGTGGTGGCAGCGGTTGAGAGCTATGAGCGCGATAATGCGCGCCCCGGCAGCTTAAATGACTTGATGGTAATG TTTGGTCTGTGCTTTGCTATGGTGGGTTTGGCGCACTTCTTGGGCGCAGAGATTGCTGGCTTCTTCTCGCCGTATACTTG GGCGGTGCAATACAGCTTTGCCAGCTCGTTCTTTTGGATGGTGGTTATCATTACCTTAATTGGTGTGGGTTTCTCCTTTA CGAAGGTGCGCCGCTTAGACCATATTGGCGCCTCAAAAATGGGCACAGTGTTTATCTTTATTCTGATTGCTGCCATTGGC ATGCAAATCAACCTAAATGGCCTCGTCTCTCAGTGGCGCCTGCTACTTATTGGTCTATTATGGATGTGTATCCATGTGGT GATTGTCTTTATCGTGGCAAGGCTTATCCGGGCGCCTTTCTTCTTCTTAGCCGTGGGCTCGAATGCCAATACTGGCGGCG CCTCTTCAGCCCCTATTGTGGCCACGGCCTTTCATCCATCACTTGCGCCTGTGGGGGTCTTCTTGGGAATATTGGGCTAT GCGGTGGGTACTATTGGCGGTTATGTTAGTACACAGCTTATGCGTTTGGTTGTGGGGTAG
Upstream 100 bases:
>100_bases CAGCAAAAATAGGGCTTCTTTATACTGACGTGATTTTTTTGCAATAAACGTTGCTTTTTAGCAGTCCATTTTATTTTGCT ATCCTGACCGGAGTTAGCCA
Downstream 100 bases:
>100_bases AGCGATAGTAGGACAATAAGACAGTAAGATAGGATATATCTAGGGCAATTGGTGTCCGCCCTGCCATAGGAGGTTATTCA TGTTCAACCTGATAAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MPDLSHLLASVTAIESLPLAFGIIMAVIGLVFYTQGLPGKFWRRFYAVLPGIVLCCFIPATLNSLGVFAEGIGSQIYNFT ATYLLPASLLLMTLSMDVPKILGLGWKAIAMFFAASFAIIISGPISLGIAKWISPEMFMDDTLWRGFSAVAGSWIGGAAN QAAMKELFGVSDDLFGMMILVDTTNASLWLLAILVMAKHSEKIDKFLRADTGSIEKVVAAVESYERDNARPGSLNDLMVM FGLCFAMVGLAHFLGAEIAGFFSPYTWAVQYSFASSFFWMVVIITLIGVGFSFTKVRRLDHIGASKMGTVFIFILIAAIG MQINLNGLVSQWRLLLIGLLWMCIHVVIVFIVARLIRAPFFFLAVGSNANTGGASSAPIVATAFHPSLAPVGVFLGILGY AVGTIGGYVSTQLMRLVVG
Sequences:
>Translated_419_residues MPDLSHLLASVTAIESLPLAFGIIMAVIGLVFYTQGLPGKFWRRFYAVLPGIVLCCFIPATLNSLGVFAEGIGSQIYNFT ATYLLPASLLLMTLSMDVPKILGLGWKAIAMFFAASFAIIISGPISLGIAKWISPEMFMDDTLWRGFSAVAGSWIGGAAN QAAMKELFGVSDDLFGMMILVDTTNASLWLLAILVMAKHSEKIDKFLRADTGSIEKVVAAVESYERDNARPGSLNDLMVM FGLCFAMVGLAHFLGAEIAGFFSPYTWAVQYSFASSFFWMVVIITLIGVGFSFTKVRRLDHIGASKMGTVFIFILIAAIG MQINLNGLVSQWRLLLIGLLWMCIHVVIVFIVARLIRAPFFFLAVGSNANTGGASSAPIVATAFHPSLAPVGVFLGILGY AVGTIGGYVSTQLMRLVVG >Mature_418_residues PDLSHLLASVTAIESLPLAFGIIMAVIGLVFYTQGLPGKFWRRFYAVLPGIVLCCFIPATLNSLGVFAEGIGSQIYNFTA TYLLPASLLLMTLSMDVPKILGLGWKAIAMFFAASFAIIISGPISLGIAKWISPEMFMDDTLWRGFSAVAGSWIGGAANQ AAMKELFGVSDDLFGMMILVDTTNASLWLLAILVMAKHSEKIDKFLRADTGSIEKVVAAVESYERDNARPGSLNDLMVMF GLCFAMVGLAHFLGAEIAGFFSPYTWAVQYSFASSFFWMVVIITLIGVGFSFTKVRRLDHIGASKMGTVFIFILIAAIGM QINLNGLVSQWRLLLIGLLWMCIHVVIVFIVARLIRAPFFFLAVGSNANTGGASSAPIVATAFHPSLAPVGVFLGILGYA VGTIGGYVSTQLMRLVVG
Specific function: Unknown
COG id: COG5505
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45109; Mature: 44978
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLSHLLASVTAIESLPLAFGIIMAVIGLVFYTQGLPGKFWRRFYAVLPGIVLCCFIPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH TLNSLGVFAEGIGSQIYNFTATYLLPASLLLMTLSMDVPKILGLGWKAIAMFFAASFAII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHH ISGPISLGIAKWISPEMFMDDTLWRGFSAVAGSWIGGAANQAAMKELFGVSDDLFGMMIL EECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHEEEEE VDTTNASLWLLAILVMAKHSEKIDKFLRADTGSIEKVVAAVESYERDNARPGSLNDLMVM EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH FGLCFAMVGLAHFLGAEIAGFFSPYTWAVQYSFASSFFWMVVIITLIGVGFSFTKVRRLD HHHHHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH HIGASKMGTVFIFILIAAIGMQINLNGLVSQWRLLLIGLLWMCIHVVIVFIVARLIRAPF HCCCHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE FFLAVGSNANTGGASSAPIVATAFHPSLAPVGVFLGILGYAVGTIGGYVSTQLMRLVVG EEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDLSHLLASVTAIESLPLAFGIIMAVIGLVFYTQGLPGKFWRRFYAVLPGIVLCCFIPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH TLNSLGVFAEGIGSQIYNFTATYLLPASLLLMTLSMDVPKILGLGWKAIAMFFAASFAII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHH ISGPISLGIAKWISPEMFMDDTLWRGFSAVAGSWIGGAANQAAMKELFGVSDDLFGMMIL EECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHEEEEE VDTTNASLWLLAILVMAKHSEKIDKFLRADTGSIEKVVAAVESYERDNARPGSLNDLMVM EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH FGLCFAMVGLAHFLGAEIAGFFSPYTWAVQYSFASSFFWMVVIITLIGVGFSFTKVRRLD HHHHHHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH HIGASKMGTVFIFILIAAIGMQINLNGLVSQWRLLLIGLLWMCIHVVIVFIVARLIRAPF HCCCHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE FFLAVGSNANTGGASSAPIVATAFHPSLAPVGVFLGILGYAVGTIGGYVSTQLMRLVVG EEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA