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The map label for this gene is yecS [C]

Identifier: 148652957

GI number: 148652957

Start: 1408527

End: 1409264

Strand: Direct

Name: yecS [C]

Synonym: PsycPRwf_1151

Alternate gene names: 148652957

Gene position: 1408527-1409264 (Clockwise)

Preceding gene: 148652956

Following gene: 148652958

Centisome position: 47.28

GC content: 47.97

Gene sequence:

>738_bases
ATGATCTCTTCGCTGCTAAACGCACTACAAAGTCTGCTCGCCATGCTGCCATTTATGTCACCAGCGCGGGCTGATATCGT
TATCCAGTCGTTTTGGCCGATGCTAAAAGGCGCCATTTACTATTCCATTCCGTTGGCCATTGCCTCATTTATTATTGGTA
TGGCCATCGCCTTGGTGGTGGCGCTGATTCGAGTGGTGCCACGTCAGGCACTTTGGCATAAGATTGCGTATAGGCTGGCA
CGTATTTATGTGTCGGCCATACGTGGTACACCAATGCTGGTGCAGCTTTTTATTATATTTTATGGTCTGCCAAGCGTTGG
GGTCATGCTTGAGCCTTTCCCAGCAGCAATTATTGCCTTCTCGCTCAATATTGGTGCTTATGCATCAGAGACTGTACGTG
CCTCTATCTTATCTATTCCTAAGGGGCAGTGGGAAGCGGGCGCTACCGTGGGTCTGACTTATTTGCAAAGCTTTCGTCAT
GTCATCTTGCCGCAAGCACTGCGAGTGTCTGTACCCCCCTTGTCGAATACCTTTATTAGCCTTGTAAAAGACACCTCTCT
TGCCTCACTTATCTTAGTCACTGAGATGTTTAAGCAGGCTCAAATTATTACTGCGCGAAACTATGAATTTATGCTGGTCT
ATACTGAGGCGGCTTTAATATATTGGGTCATCTGTCTGGCTTTGAGCGCCGTGCAAGGTCGACTCGAGACCCGTTTGGAT
CGCTATGTGGCCAAATAG

Upstream 100 bases:

>100_bases
CGGCACTGGCAAAAATCAACGAAGCGATGGATGAGCTACATAAAGATGGCACATTAACCCGATTAAGCGAGCAGTTTTTC
GGTGAGGATATCAGCAAAAA

Downstream 100 bases:

>100_bases
TTTGGTCAGGATATGGCCAGCAGCACTCATTAGGAAACCGCTATGATAAAAATAACTAATATTCAAAAAGCCTTTGGCGA
CAATGAGGTGCTCAAGGGCA

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MISSLLNALQSLLAMLPFMSPARADIVIQSFWPMLKGAIYYSIPLAIASFIIGMAIALVVALIRVVPRQALWHKIAYRLA
RIYVSAIRGTPMLVQLFIIFYGLPSVGVMLEPFPAAIIAFSLNIGAYASETVRASILSIPKGQWEAGATVGLTYLQSFRH
VILPQALRVSVPPLSNTFISLVKDTSLASLILVTEMFKQAQIITARNYEFMLVYTEAALIYWVICLALSAVQGRLETRLD
RYVAK

Sequences:

>Translated_245_residues
MISSLLNALQSLLAMLPFMSPARADIVIQSFWPMLKGAIYYSIPLAIASFIIGMAIALVVALIRVVPRQALWHKIAYRLA
RIYVSAIRGTPMLVQLFIIFYGLPSVGVMLEPFPAAIIAFSLNIGAYASETVRASILSIPKGQWEAGATVGLTYLQSFRH
VILPQALRVSVPPLSNTFISLVKDTSLASLILVTEMFKQAQIITARNYEFMLVYTEAALIYWVICLALSAVQGRLETRLD
RYVAK
>Mature_245_residues
MISSLLNALQSLLAMLPFMSPARADIVIQSFWPMLKGAIYYSIPLAIASFIIGMAIALVVALIRVVPRQALWHKIAYRLA
RIYVSAIRGTPMLVQLFIIFYGLPSVGVMLEPFPAAIIAFSLNIGAYASETVRASILSIPKGQWEAGATVGLTYLQSFRH
VILPQALRVSVPPLSNTFISLVKDTSLASLILVTEMFKQAQIITARNYEFMLVYTEAALIYWVICLALSAVQGRLETRLD
RYVAK

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=217, Percent_Identity=50.2304147465438, Blast_Score=212, Evalue=2e-56,
Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=38.4976525821596, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1787087, Length=239, Percent_Identity=32.6359832635983, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1787086, Length=206, Percent_Identity=31.5533980582524, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=34.2995169082126, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1786874, Length=172, Percent_Identity=33.1395348837209, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1788646, Length=216, Percent_Identity=29.1666666666667, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1788645, Length=209, Percent_Identity=30.1435406698565, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=29.9065420560748, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI48994930, Length=154, Percent_Identity=34.4155844155844, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27083; Mature: 27083

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSLLNALQSLLAMLPFMSPARADIVIQSFWPMLKGAIYYSIPLAIASFIIGMAIALVV
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIRVVPRQALWHKIAYRLARIYVSAIRGTPMLVQLFIIFYGLPSVGVMLEPFPAAIIAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEECCCHHHHHHH
SLNIGAYASETVRASILSIPKGQWEAGATVGLTYLQSFRHVILPQALRVSVPPLSNTFIS
HHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHH
LVKDTSLASLILVTEMFKQAQIITARNYEFMLVYTEAALIYWVICLALSAVQGRLETRLD
HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVAK
HHHCC
>Mature Secondary Structure
MISSLLNALQSLLAMLPFMSPARADIVIQSFWPMLKGAIYYSIPLAIASFIIGMAIALVV
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIRVVPRQALWHKIAYRLARIYVSAIRGTPMLVQLFIIFYGLPSVGVMLEPFPAAIIAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEECCCHHHHHHH
SLNIGAYASETVRASILSIPKGQWEAGATVGLTYLQSFRHVILPQALRVSVPPLSNTFIS
HHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHH
LVKDTSLASLILVTEMFKQAQIITARNYEFMLVYTEAALIYWVICLALSAVQGRLETRLD
HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RYVAK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]