| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is cysU [H]
Identifier: 148652940
GI number: 148652940
Start: 1389590
End: 1390471
Strand: Direct
Name: cysU [H]
Synonym: PsycPRwf_1134
Alternate gene names: 148652940
Gene position: 1389590-1390471 (Clockwise)
Preceding gene: 148652939
Following gene: 148652941
Centisome position: 46.65
GC content: 49.43
Gene sequence:
>882_bases ATGAACCAGTCAGCCCCATCGACAGCTCCTATCCGCAAGCGCTCTTGGCTTACCCGATTGCGTCAGCGCAACGTGTTACC CGGTTTTGGCTTGTCTATGGGTATCACCGTATTGAGCTTATCGTTATTGGTTATTCTACCCTTTGCGATGATGGCTTATA CCACCACCCAAATGGGGCTAAGTGGTTTTATCGAGGCCATCAGTCAGCTTCAGGTGAAGGCTGCGATTATTTTGTCACTG AAGATGTCGTTTTATGCCATGTTGACCAATATGGTGTTCGGTACTTTGGTGGCGTGGGTATTGGTGCGTTATGACTTCAT AGGTAAGTCGCTGATCAATGCCTTGGTGGATCTGCCTTTTGCTTTGCCCACGGCGGTGACTGGTATTTCACTGGCCACCT TGTATGCGCCCAATGGCTTAATCGGTCAGTTCTTTGACAAGGTGGGTATTCAAGTTGCCTTTACCCCCATTGGTATTTGG CTGGCCTTGGTGGTGGTAAGCTTTCCATTTATCGTACGTGCTGTGCAGCCGGTATTAGAGGAGCTGTCAGTTGAGTATGA AGAAGCGGCCGCGGTACTGGGGGCCAATCGCTTGACCACCTTTCGTACGGTGATACTGCCAGAGCTGTTTCCTGCCTTAT TGATGGGTGCAGGCATGATGTTTGCACGCGCCACCGGAGAGTATGGCTCGGTTATCTTTATTGCTGGTAATATCCCGATG CAGTCTGAGATTTTACCGCTGATTATTATCAGTAAGCTTGAGCAATTCGATATCCAAGGGGCATCCGCGGTGGCGTTATT TATGCTCATGATCTCCTTTGTCATCTTATTGGCCATCAACCTACTACAGTGGCGTTTGTCTCGCCGTGTCGGGGCTAAGT AA
Upstream 100 bases:
>100_bases GATAGCCTTATTCATCATTAAACTTAATAACCTTGCCCTGTTAGCATGAGCAGCACCATACAAAAGCATGACCCATTTTC ATCAATGCAGTGAGACCTTC
Downstream 100 bases:
>100_bases GCCACTCTAGGCCAAGTTATAGGCCAAGTTAGGCCAAGTTATGGGTTAAGTTGTGAGTCAAGTTCAGCCTGCTTTATACA GTACATTCGGATAATTAGGA
Product: sulfate ABC transporter inner membrane subunit CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MNQSAPSTAPIRKRSWLTRLRQRNVLPGFGLSMGITVLSLSLLVILPFAMMAYTTTQMGLSGFIEAISQLQVKAAIILSL KMSFYAMLTNMVFGTLVAWVLVRYDFIGKSLINALVDLPFALPTAVTGISLATLYAPNGLIGQFFDKVGIQVAFTPIGIW LALVVVSFPFIVRAVQPVLEELSVEYEEAAAVLGANRLTTFRTVILPELFPALLMGAGMMFARATGEYGSVIFIAGNIPM QSEILPLIIISKLEQFDIQGASAVALFMLMISFVILLAINLLQWRLSRRVGAK
Sequences:
>Translated_293_residues MNQSAPSTAPIRKRSWLTRLRQRNVLPGFGLSMGITVLSLSLLVILPFAMMAYTTTQMGLSGFIEAISQLQVKAAIILSL KMSFYAMLTNMVFGTLVAWVLVRYDFIGKSLINALVDLPFALPTAVTGISLATLYAPNGLIGQFFDKVGIQVAFTPIGIW LALVVVSFPFIVRAVQPVLEELSVEYEEAAAVLGANRLTTFRTVILPELFPALLMGAGMMFARATGEYGSVIFIAGNIPM QSEILPLIIISKLEQFDIQGASAVALFMLMISFVILLAINLLQWRLSRRVGAK >Mature_293_residues MNQSAPSTAPIRKRSWLTRLRQRNVLPGFGLSMGITVLSLSLLVILPFAMMAYTTTQMGLSGFIEAISQLQVKAAIILSL KMSFYAMLTNMVFGTLVAWVLVRYDFIGKSLINALVDLPFALPTAVTGISLATLYAPNGLIGQFFDKVGIQVAFTPIGIW LALVVVSFPFIVRAVQPVLEELSVEYEEAAAVLGANRLTTFRTVILPELFPALLMGAGMMFARATGEYGSVIFIAGNIPM QSEILPLIIISKLEQFDIQGASAVALFMLMISFVILLAINLLQWRLSRRVGAK
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=269, Percent_Identity=48.3271375464684, Blast_Score=230, Evalue=9e-62, Organism=Escherichia coli, GI87082099, Length=273, Percent_Identity=30.7692307692308, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1786980, Length=224, Percent_Identity=37.0535714285714, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1787714, Length=263, Percent_Identity=31.5589353612167, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31968; Mature: 31968
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSAPSTAPIRKRSWLTRLRQRNVLPGFGLSMGITVLSLSLLVILPFAMMAYTTTQMGL CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFIEAISQLQVKAAIILSLKMSFYAMLTNMVFGTLVAWVLVRYDFIGKSLINALVDLPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ALPTAVTGISLATLYAPNGLIGQFFDKVGIQVAFTPIGIWLALVVVSFPFIVRAVQPVLE HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH ELSVEYEEAAAVLGANRLTTFRTVILPELFPALLMGAGMMFARATGEYGSVIFIAGNIPM HHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCC QSEILPLIIISKLEQFDIQGASAVALFMLMISFVILLAINLLQWRLSRRVGAK CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNQSAPSTAPIRKRSWLTRLRQRNVLPGFGLSMGITVLSLSLLVILPFAMMAYTTTQMGL CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFIEAISQLQVKAAIILSLKMSFYAMLTNMVFGTLVAWVLVRYDFIGKSLINALVDLPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ALPTAVTGISLATLYAPNGLIGQFFDKVGIQVAFTPIGIWLALVVVSFPFIVRAVQPVLE HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH ELSVEYEEAAAVLGANRLTTFRTVILPELFPALLMGAGMMFARATGEYGSVIFIAGNIPM HHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCC QSEILPLIIISKLEQFDIQGASAVALFMLMISFVILLAINLLQWRLSRRVGAK CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]