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The map label for this gene is lcrT [H]

Identifier: 148652925

GI number: 148652925

Start: 1374017

End: 1374391

Strand: Direct

Name: lcrT [H]

Synonym: PsycPRwf_1118

Alternate gene names: 148652925

Gene position: 1374017-1374391 (Clockwise)

Preceding gene: 148652924

Following gene: 148652926

Centisome position: 46.12

GC content: 42.13

Gene sequence:

>375_bases
ATGAGTCGAACCGCTTACTACTATAAGCCTAAGCTATCTGATGATAGTGAGATTATTGATGTCTTAAACAAGCTTACTGA
CAAGCACAATCGTTGGGGTTTCCCAAAGTGTTTTAAGCGTATACGCAAGCTTGGCTACTCATGGAATCACAAGCGAGTAC
ACCGTGTTTATACCACGTTAAACTTAAACCTACGCCGTAAGTCTAAAAGACGGCTACCAACACGTAATCCCCAGCCGCTA
AGTGTGCCAAACGCATTGGGGCATACTTGGTCTATGGACTTTATGAGCGATAAGCTGCACAACAATATTCGCTTTCGAAC
CTTTAATGTGATTGATGATTACAACCGTGAAGTATTAGGCATTGATGTATGCTGA

Upstream 100 bases:

>100_bases
TAAAAAAGCTATAGCGCCTGCCCTTGAGCGCAAAGTCTGGGCACAAGAGTTACAGGCGCAGTATGGTGTTAGTATTGCAT
TGAGCTGTCAGGTGGTCTGT

Downstream 100 bases:

>100_bases
AAAAAACGGACAAAAATATTTGGTAAACTAGAATCCTAAACAGGAGTTTACCATGAGTAAGAAAAGAGTAGAATACAGCG
ACACTTTCAAAGCTGAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSRTAYYYKPKLSDDSEIIDVLNKLTDKHNRWGFPKCFKRIRKLGYSWNHKRVHRVYTTLNLNLRRKSKRRLPTRNPQPL
SVPNALGHTWSMDFMSDKLHNNIRFRTFNVIDDYNREVLGIDVC

Sequences:

>Translated_124_residues
MSRTAYYYKPKLSDDSEIIDVLNKLTDKHNRWGFPKCFKRIRKLGYSWNHKRVHRVYTTLNLNLRRKSKRRLPTRNPQPL
SVPNALGHTWSMDFMSDKLHNNIRFRTFNVIDDYNREVLGIDVC
>Mature_123_residues
SRTAYYYKPKLSDDSEIIDVLNKLTDKHNRWGFPKCFKRIRKLGYSWNHKRVHRVYTTLNLNLRRKSKRRLPTRNPQPLS
VPNALGHTWSMDFMSDKLHNNIRFRTFNVIDDYNREVLGIDVC

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14939; Mature: 14808

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTAYYYKPKLSDDSEIIDVLNKLTDKHNRWGFPKCFKRIRKLGYSWNHKRVHRVYTTL
CCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHC
NLNLRRKSKRRLPTRNPQPLSVPNALGHTWSMDFMSDKLHNNIRFRTFNVIDDYNREVLG
CCEECCHHHHCCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCEEEEEECCCCCCCEEEE
IDVC
EECC
>Mature Secondary Structure 
SRTAYYYKPKLSDDSEIIDVLNKLTDKHNRWGFPKCFKRIRKLGYSWNHKRVHRVYTTL
CCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHC
NLNLRRKSKRRLPTRNPQPLSVPNALGHTWSMDFMSDKLHNNIRFRTFNVIDDYNREVLG
CCEECCHHHHCCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCEEEEEECCCCCCCEEEE
IDVC
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]