| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is cls [H]
Identifier: 148652920
GI number: 148652920
Start: 1367055
End: 1368491
Strand: Direct
Name: cls [H]
Synonym: PsycPRwf_1113
Alternate gene names: 148652920
Gene position: 1367055-1368491 (Clockwise)
Preceding gene: 148652919
Following gene: 148652924
Centisome position: 45.89
GC content: 51.64
Gene sequence:
>1437_bases ATGTTTTTGGATTTTTTACTCGGCCTACATTTTTTGATATGGCTTACCATCTCGCTGCGGGTATTGGCCCGCCATGATCT GTCCGCTCCGGCTCGTCTGGCTTGGCTGGTGGTGCTGTTTATCTTGCCATACGTAGGCGTGGTGGTGTATTGGATGTTTG GTGAGGTGCATTTAGGTATTAACTTCACCCACCGCTATGATCGCATCACTCAGAAGCTGGCCGAAAGCTATCCTCAAGTG CTGGGCGATAAAGACACGATGGCACAGGTGGTAGAGCGTGAATATCAAGCGGCCGGATATGCGGCGAGTGTCACCGGCTT TCACACCACATTGGGCAACCGTGCCGAGCTTATGGCCGATGCCAAGGCCACGCAGCAGCGTATGATTGCCGACTTCGATG CCGCCACAGATCACATTCACGTGATGTATTATATTTGGCTAGATGATGACATGGGGACCGCCGTGGGTGAGGCATTAATG CGTGCTGCCAAACGCGGGGTGCGCTGCCGTGCCATGGTCGATGGCTTAGGGTCACGCAAGCTGTTACGCTCCTTATTGTG GAAGCGGATGCAAGATGCTGGGGTTGAGGTGAGTGTGGCGCTACCGATCAATAACTTGCTAAAAGTGCTGCTGTTTAGTC GTATTGACCTACGCAATCACCGTAAGATTACCGTGATTGATGGCAAGATTGGCTATGTCGGCAGCCGCAACAGTGCTGAT CCTGAGTTTCGGATTAAGCCCAAGTATGCGCCCTGGGTCGATATCATGCTGCGGGTACAAGGCCCGCTGGTTGCCCAAAA TCAGATGCTCTTTGCCAATGACTGGCTGATGGAAAACCCCGATACCGATTTTAACAGCTTCCCTTATGTCACCGAGCCGC ATCCTGAGGGCATTGCCGCTCAAGTCTTCGCCGATGGTCCTACTCAGCGTCAAGGCACCACGCCGCAGTTTTTGAGTACG CTGATGAGTCAGGCACGTCACACCCTTATCATCTCCACTCCCTATTTTGTCCCAGATTACACCTTGATTAATATGCTGTG TGCCACCGCTTACCGCGGTGTGGCGGTGAGCATTATCTTTCCAAAGAACAACGACTCCTTTATTGTGGCCGCTACCAGTC ACAGCTACTATTGGCAGCTGCTTGAAGCCGGCGTGAAGGTGTATGAGTATAAGCCTGGCTTACTGCATGCCAAGACTCTA ACGGTGGATGGTAAGATCAGTCTAATTGGCTCGACCAATTTAGACCTGCGCAGCTTCGACTTAAACTATGAGAACAATGC GTTATTTTATGATGAAGCGCTCACGGCAAAGATTGTGGAGCGTCAGTATGCGTATATCGCTGACTCAGATGAGGTGATGC GTCAAGAGGTGCGTGACTGGCCGATTTATTACCGCATCTGGATTAATATTGTCTCCACCATGGGGCCGCTGCTCTAG
Upstream 100 bases:
>100_bases AATGACAAGTGATCACCGCTTAGCTTTTAGAGTAGGGCTTTACTATCAACCACTATAATAAGAAGCACCCTTGTATTTTT TATACTTAGAGAGTGACGGC
Downstream 100 bases:
>100_bases ACAAACACCGTTACCAAGGGTAAACCGGCCTTTACTGAGTATTTATGTACCGACTGAGGCCAATTTGCCGATATTAGAGG CGGGCAAGCGTCAGCCTGTG
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MFLDFLLGLHFLIWLTISLRVLARHDLSAPARLAWLVVLFILPYVGVVVYWMFGEVHLGINFTHRYDRITQKLAESYPQV LGDKDTMAQVVEREYQAAGYAASVTGFHTTLGNRAELMADAKATQQRMIADFDAATDHIHVMYYIWLDDDMGTAVGEALM RAAKRGVRCRAMVDGLGSRKLLRSLLWKRMQDAGVEVSVALPINNLLKVLLFSRIDLRNHRKITVIDGKIGYVGSRNSAD PEFRIKPKYAPWVDIMLRVQGPLVAQNQMLFANDWLMENPDTDFNSFPYVTEPHPEGIAAQVFADGPTQRQGTTPQFLST LMSQARHTLIISTPYFVPDYTLINMLCATAYRGVAVSIIFPKNNDSFIVAATSHSYYWQLLEAGVKVYEYKPGLLHAKTL TVDGKISLIGSTNLDLRSFDLNYENNALFYDEALTAKIVERQYAYIADSDEVMRQEVRDWPIYYRIWINIVSTMGPLL
Sequences:
>Translated_478_residues MFLDFLLGLHFLIWLTISLRVLARHDLSAPARLAWLVVLFILPYVGVVVYWMFGEVHLGINFTHRYDRITQKLAESYPQV LGDKDTMAQVVEREYQAAGYAASVTGFHTTLGNRAELMADAKATQQRMIADFDAATDHIHVMYYIWLDDDMGTAVGEALM RAAKRGVRCRAMVDGLGSRKLLRSLLWKRMQDAGVEVSVALPINNLLKVLLFSRIDLRNHRKITVIDGKIGYVGSRNSAD PEFRIKPKYAPWVDIMLRVQGPLVAQNQMLFANDWLMENPDTDFNSFPYVTEPHPEGIAAQVFADGPTQRQGTTPQFLST LMSQARHTLIISTPYFVPDYTLINMLCATAYRGVAVSIIFPKNNDSFIVAATSHSYYWQLLEAGVKVYEYKPGLLHAKTL TVDGKISLIGSTNLDLRSFDLNYENNALFYDEALTAKIVERQYAYIADSDEVMRQEVRDWPIYYRIWINIVSTMGPLL >Mature_478_residues MFLDFLLGLHFLIWLTISLRVLARHDLSAPARLAWLVVLFILPYVGVVVYWMFGEVHLGINFTHRYDRITQKLAESYPQV LGDKDTMAQVVEREYQAAGYAASVTGFHTTLGNRAELMADAKATQQRMIADFDAATDHIHVMYYIWLDDDMGTAVGEALM RAAKRGVRCRAMVDGLGSRKLLRSLLWKRMQDAGVEVSVALPINNLLKVLLFSRIDLRNHRKITVIDGKIGYVGSRNSAD PEFRIKPKYAPWVDIMLRVQGPLVAQNQMLFANDWLMENPDTDFNSFPYVTEPHPEGIAAQVFADGPTQRQGTTPQFLST LMSQARHTLIISTPYFVPDYTLINMLCATAYRGVAVSIIFPKNNDSFIVAATSHSYYWQLLEAGVKVYEYKPGLLHAKTL TVDGKISLIGSTNLDLRSFDLNYENNALFYDEALTAKIVERQYAYIADSDEVMRQEVRDWPIYYRIWINIVSTMGPLL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=484, Percent_Identity=34.504132231405, Blast_Score=280, Evalue=1e-76, Organism=Escherichia coli, GI1787007, Length=377, Percent_Identity=27.3209549071618, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI87081826, Length=402, Percent_Identity=27.363184079602, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 54285; Mature: 54285
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLDFLLGLHFLIWLTISLRVLARHDLSAPARLAWLVVLFILPYVGVVVYWMFGEVHLGI CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE NFTHRYDRITQKLAESYPQVLGDKDTMAQVVEREYQAAGYAASVTGFHTTLGNRAELMAD EEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCHHHHCCCHHHHHHH AKATQQRMIADFDAATDHIHVMYYIWLDDDMGTAVGEALMRAAKRGVRCRAMVDGLGSRK HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCEEEHHHCCCCHHH LLRSLLWKRMQDAGVEVSVALPINNLLKVLLFSRIDLRNHRKITVIDGKIGYVGSRNSAD HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCCCCC PEFRIKPKYAPWVDIMLRVQGPLVAQNQMLFANDWLMENPDTDFNSFPYVTEPHPEGIAA CCEEECCCCCCCEEEEEEECCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEE QVFADGPTQRQGTTPQFLSTLMSQARHTLIISTPYFVPDYTLINMLCATAYRGVAVSIIF EEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEE PKNNDSFIVAATSHSYYWQLLEAGVKVYEYKPGLLHAKTLTVDGKISLIGSTNLDLRSFD ECCCCCEEEEEECCHHHHHHHHCCCEEEEECCCEEEEEEEEECCEEEEEECCCCEEEEEE LNYENNALFYDEALTAKIVERQYAYIADSDEVMRQEVRDWPIYYRIWINIVSTMGPLL CCCCCCEEEEHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCEEEHHHHHHHHHHCCCC >Mature Secondary Structure MFLDFLLGLHFLIWLTISLRVLARHDLSAPARLAWLVVLFILPYVGVVVYWMFGEVHLGI CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE NFTHRYDRITQKLAESYPQVLGDKDTMAQVVEREYQAAGYAASVTGFHTTLGNRAELMAD EEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCHHHHCCCHHHHHHH AKATQQRMIADFDAATDHIHVMYYIWLDDDMGTAVGEALMRAAKRGVRCRAMVDGLGSRK HHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCEEEHHHCCCCHHH LLRSLLWKRMQDAGVEVSVALPINNLLKVLLFSRIDLRNHRKITVIDGKIGYVGSRNSAD HHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCCCCC PEFRIKPKYAPWVDIMLRVQGPLVAQNQMLFANDWLMENPDTDFNSFPYVTEPHPEGIAA CCEEECCCCCCCEEEEEEECCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEE QVFADGPTQRQGTTPQFLSTLMSQARHTLIISTPYFVPDYTLINMLCATAYRGVAVSIIF EEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEE PKNNDSFIVAATSHSYYWQLLEAGVKVYEYKPGLLHAKTLTVDGKISLIGSTNLDLRSFD ECCCCCEEEEEECCHHHHHHHHCCCEEEEECCCEEEEEEEEECCEEEEEECCCCEEEEEE LNYENNALFYDEALTAKIVERQYAYIADSDEVMRQEVRDWPIYYRIWINIVSTMGPLL CCCCCCEEEEHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCEEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA