| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652881
Identifier: 148652881
GI number: 148652881
Start: 1295785
End: 1297560
Strand: Direct
Name: 148652881
Synonym: PsycPRwf_1074
Alternate gene names: NA
Gene position: 1295785-1297560 (Clockwise)
Preceding gene: 148652880
Following gene: 148652882
Centisome position: 43.5
GC content: 45.21
Gene sequence:
>1776_bases ATGACGTGCAATACTCATATAAATACAGCATCAAAGCCGGCAGCACAGCGATCAGAGCAAGCAAACGCCGCACTGGCTAG AAAGCTGCCACGACTCGAAAAACTGCCACTATCACTGACCTTGCTGGCAGGCAGCCTGTTACTTGCCGGCTGTCAAACCA CAGCGCTGCAATCACATAATGATGCATCGCCTATCGAGGCAAAAGCAGCGCTTAAGCAGGCACTACAGAAGCAGCGTACG AGCGCTTATAGCTATCATAGCCAGATTAAAATCAGTCCGGCCATGTCACCTGACACGGTTAACGCTGAGGACTTAGGCGT CACTGACTCTTTAGATACTTACTGCGAAGATACGCATGATCAGGCGTATATGGGCTTACTTGAGCAGGCAGATGGTGCGC AAAAACCTGTGCAATCAGCCCAGTTTGACGCACAAAGACAAGCCATTAAACAAGCTTATATCGCTTGTAGCAAGGCTTAT CAAGCGTGGCAATATAATCAGCCTGATGAGTATGACACTGAGAACCAAATCGACTATGAACAAAGTGAGCAGACAGCTGA TGAGAGTGTAGCGCCTGCTGAGCACGCTATCAAACCGGTCTCTGAGTATTACCAAAACCTGTTTGATAATTATCAGCACA AGCCCACTAAGCTCGATGTCAAAAAAGCCAAACTGCTACAGGCTTATCTATTAAAGCCATCGTCTATCCATGCTCAAGGC AGCTATCAGCCCGCTGCTGGTAAGTTTACGATCCTAATGAGCGCTCAGTATTTTGCCCATAATAATAAAATCTCTATCAA TCAGCCGATTTATGTAGATGCCAAGACCGGCAGTATTTATTTATGGGCCGATAATTTTGCGATGTTAACCTCAGAGTATC TAGATACTAAGCTTGGCACCACTTGGCACAATAAATGGATAAAGCTAACTTTAAATGATGGTACGTTGCCTCAAGGTTTT ACTCAGTCGCTAATCAAAGCGCACTTCCAAGCTTTAGACAGACTGTATGAATCTGCGCCGGTTAACGAGTTTGAACCAGT GGCACCCCGTCAGTTAAATAGACTCTCTGGAGCGTTAACTGAGCAGCAGCTTAGCCTTATGTTGGCCAGCCCACAGGTGA TTCGCCGCACCCAAACAGTGCAAGATTATTATCAGTCTTATCATGACTATATCCGTACGTTGTATTCTATTCTTAGTGCC AAGTATCCGCAGCTTGTGGCCGAGACTGATGCTGTCAATGTTTCCAATACTGCCAATACTGACAGCAAGGACAATAGCAC TGCTGAGTCGGTAAGGCTAAACGAGGCCACTGGCAATACATTTAGCAGTAAATCCTTGGTACAAAAAATGCTCACGTCCA TGAGAACTATGATAGACACTGAGTCTGATCAGCTGATATATGGGGTGTATAGCGGTGAAGGTCAGCTGTCTGACGATCAA ACGCTTAATCAAAGCGTAGAGCAGCTTTATGGCCTAGCTAATAACGGTCAAATACAGTGGCAGTATCTGCATAATATAAC CAGCCAGCCAGACATTGATAGCCTGAGCGTCGATGTGTTTCAGCGTTATTTGCCACTTTCAAAAACACCGCTAGACTTTG TTAACTTGCCGGCCAATATACAAAAGCCTAATGCCAATAATAGCGTTGATCTAAGACAATATAGTGACGCGTTAACCGAG CGTTATCGCAGTGGTGAAGGGACTGTGATAGGTAGATTGTTATTAAGTCAAATTTTGCAACCAGACTTAGTTGGTCCGCC ATTACAAAGCGAGTGA
Upstream 100 bases:
>100_bases AAGCCGTTTTGAGTAAAGGCCTTTAAAGCGCTTTATGCGAACCCTTTACAATCTACCTCAATTATCACCCTTATCAGAAC TAGGCTATCAAGGACTTCTC
Downstream 100 bases:
>100_bases TGGAGCAAGGCTAAGTCGTAACAGGTATCTATCTCGGCGTAAGTTTATCTAAGCATAAGTTTATCTAGGCATAAGTTTAT CTAGGCATAAGTTTAATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MTCNTHINTASKPAAQRSEQANAALARKLPRLEKLPLSLTLLAGSLLLAGCQTTALQSHNDASPIEAKAALKQALQKQRT SAYSYHSQIKISPAMSPDTVNAEDLGVTDSLDTYCEDTHDQAYMGLLEQADGAQKPVQSAQFDAQRQAIKQAYIACSKAY QAWQYNQPDEYDTENQIDYEQSEQTADESVAPAEHAIKPVSEYYQNLFDNYQHKPTKLDVKKAKLLQAYLLKPSSIHAQG SYQPAAGKFTILMSAQYFAHNNKISINQPIYVDAKTGSIYLWADNFAMLTSEYLDTKLGTTWHNKWIKLTLNDGTLPQGF TQSLIKAHFQALDRLYESAPVNEFEPVAPRQLNRLSGALTEQQLSLMLASPQVIRRTQTVQDYYQSYHDYIRTLYSILSA KYPQLVAETDAVNVSNTANTDSKDNSTAESVRLNEATGNTFSSKSLVQKMLTSMRTMIDTESDQLIYGVYSGEGQLSDDQ TLNQSVEQLYGLANNGQIQWQYLHNITSQPDIDSLSVDVFQRYLPLSKTPLDFVNLPANIQKPNANNSVDLRQYSDALTE RYRSGEGTVIGRLLLSQILQPDLVGPPLQSE
Sequences:
>Translated_591_residues MTCNTHINTASKPAAQRSEQANAALARKLPRLEKLPLSLTLLAGSLLLAGCQTTALQSHNDASPIEAKAALKQALQKQRT SAYSYHSQIKISPAMSPDTVNAEDLGVTDSLDTYCEDTHDQAYMGLLEQADGAQKPVQSAQFDAQRQAIKQAYIACSKAY QAWQYNQPDEYDTENQIDYEQSEQTADESVAPAEHAIKPVSEYYQNLFDNYQHKPTKLDVKKAKLLQAYLLKPSSIHAQG SYQPAAGKFTILMSAQYFAHNNKISINQPIYVDAKTGSIYLWADNFAMLTSEYLDTKLGTTWHNKWIKLTLNDGTLPQGF TQSLIKAHFQALDRLYESAPVNEFEPVAPRQLNRLSGALTEQQLSLMLASPQVIRRTQTVQDYYQSYHDYIRTLYSILSA KYPQLVAETDAVNVSNTANTDSKDNSTAESVRLNEATGNTFSSKSLVQKMLTSMRTMIDTESDQLIYGVYSGEGQLSDDQ TLNQSVEQLYGLANNGQIQWQYLHNITSQPDIDSLSVDVFQRYLPLSKTPLDFVNLPANIQKPNANNSVDLRQYSDALTE RYRSGEGTVIGRLLLSQILQPDLVGPPLQSE >Mature_590_residues TCNTHINTASKPAAQRSEQANAALARKLPRLEKLPLSLTLLAGSLLLAGCQTTALQSHNDASPIEAKAALKQALQKQRTS AYSYHSQIKISPAMSPDTVNAEDLGVTDSLDTYCEDTHDQAYMGLLEQADGAQKPVQSAQFDAQRQAIKQAYIACSKAYQ AWQYNQPDEYDTENQIDYEQSEQTADESVAPAEHAIKPVSEYYQNLFDNYQHKPTKLDVKKAKLLQAYLLKPSSIHAQGS YQPAAGKFTILMSAQYFAHNNKISINQPIYVDAKTGSIYLWADNFAMLTSEYLDTKLGTTWHNKWIKLTLNDGTLPQGFT QSLIKAHFQALDRLYESAPVNEFEPVAPRQLNRLSGALTEQQLSLMLASPQVIRRTQTVQDYYQSYHDYIRTLYSILSAK YPQLVAETDAVNVSNTANTDSKDNSTAESVRLNEATGNTFSSKSLVQKMLTSMRTMIDTESDQLIYGVYSGEGQLSDDQT LNQSVEQLYGLANNGQIQWQYLHNITSQPDIDSLSVDVFQRYLPLSKTPLDFVNLPANIQKPNANNSVDLRQYSDALTER YRSGEGTVIGRLLLSQILQPDLVGPPLQSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65902; Mature: 65771
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCNTHINTASKPAAQRSEQANAALARKLPRLEKLPLSLTLLAGSLLLAGCQTTALQSHN CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCHHHHHCCCC DASPIEAKAALKQALQKQRTSAYSYHSQIKISPAMSPDTVNAEDLGVTDSLDTYCEDTHD CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHCCCCCCHHHHHCCCCH QAYMGLLEQADGAQKPVQSAQFDAQRQAIKQAYIACSKAYQAWQYNQPDEYDTENQIDYE HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH QSEQTADESVAPAEHAIKPVSEYYQNLFDNYQHKPTKLDVKKAKLLQAYLLKPSSIHAQG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC SYQPAAGKFTILMSAQYFAHNNKISINQPIYVDAKTGSIYLWADNFAMLTSEYLDTKLGT CCCCCCCCEEEEEEEHHHHCCCEEEECCCEEEEECCCEEEEEECCHHHHHHHHHHHHCCC TWHNKWIKLTLNDGTLPQGFTQSLIKAHFQALDRLYESAPVNEFEPVAPRQLNRLSGALT CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH EQQLSLMLASPQVIRRTQTVQDYYQSYHDYIRTLYSILSAKYPQLVAETDAVNVSNTANT HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCC DSKDNSTAESVRLNEATGNTFSSKSLVQKMLTSMRTMIDTESDQLIYGVYSGEGQLSDDQ CCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH TLNQSVEQLYGLANNGQIQWQYLHNITSQPDIDSLSVDVFQRYLPLSKTPLDFVNLPANI HHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCC QKPNANNSVDLRQYSDALTERYRSGEGTVIGRLLLSQILQPDLVGPPLQSE CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TCNTHINTASKPAAQRSEQANAALARKLPRLEKLPLSLTLLAGSLLLAGCQTTALQSHN CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCHHHHHCCCC DASPIEAKAALKQALQKQRTSAYSYHSQIKISPAMSPDTVNAEDLGVTDSLDTYCEDTHD CCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHCCCCCCHHHHHCCCCH QAYMGLLEQADGAQKPVQSAQFDAQRQAIKQAYIACSKAYQAWQYNQPDEYDTENQIDYE HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH QSEQTADESVAPAEHAIKPVSEYYQNLFDNYQHKPTKLDVKKAKLLQAYLLKPSSIHAQG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC SYQPAAGKFTILMSAQYFAHNNKISINQPIYVDAKTGSIYLWADNFAMLTSEYLDTKLGT CCCCCCCCEEEEEEEHHHHCCCEEEECCCEEEEECCCEEEEEECCHHHHHHHHHHHHCCC TWHNKWIKLTLNDGTLPQGFTQSLIKAHFQALDRLYESAPVNEFEPVAPRQLNRLSGALT CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH EQQLSLMLASPQVIRRTQTVQDYYQSYHDYIRTLYSILSAKYPQLVAETDAVNVSNTANT HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCC DSKDNSTAESVRLNEATGNTFSSKSLVQKMLTSMRTMIDTESDQLIYGVYSGEGQLSDDQ CCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH TLNQSVEQLYGLANNGQIQWQYLHNITSQPDIDSLSVDVFQRYLPLSKTPLDFVNLPANI HHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCC QKPNANNSVDLRQYSDALTERYRSGEGTVIGRLLLSQILQPDLVGPPLQSE CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA