| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652875
Identifier: 148652875
GI number: 148652875
Start: 1288253
End: 1288618
Strand: Direct
Name: 148652875
Synonym: PsycPRwf_1068
Alternate gene names: NA
Gene position: 1288253-1288618 (Clockwise)
Preceding gene: 148652872
Following gene: 148652876
Centisome position: 43.24
GC content: 39.89
Gene sequence:
>366_bases ATGGAACAACAAATTAGCGAGCTTGAACAACAGCGTTTTAACTATTTACTAAATAAACAGTATGATGAGTTTGCTGCACT GTGTGATGCCGATTTACGCTATGTGCACAGCAGTGGTGCGATTGATGACTTGTCTTCGTATTTACAAAAACTTAAGTCTG GGTTCTATGAGTATCAACAGCTTGACTATGATATCAATCAGGTCATCGATATGCAGGATTATGTTATGGTTACCGGTGAT TTTTATGCGCAGGTCTTAGTTGATGGCCAGCCTATCTCTTTGAAAAACCGCGCCCTCTGTATTTGGAAAAAGCGGGGTGA TGAGTTTAAGTTTTTTATGTATCAGGGCACGCCTTTTACTAAGTGA
Upstream 100 bases:
>100_bases CAGTGCGTAATGAGAAAGTTTTTTATAATAAAATAAGCTTAAAATTCGCCACATTGAAAGCTAAATTGACGTTAAAGAAA ATTAGGTTAAAGAGGAAGTT
Downstream 100 bases:
>100_bases TTGAACTGTGAGCTTCGGCTCATAGGTAGGTCTTTAAATATATGGGATATTATCTCATCTTTTAAATGACAAAAATTTTA ATGCTAAAATAGACATCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MEQQISELEQQRFNYLLNKQYDEFAALCDADLRYVHSSGAIDDLSSYLQKLKSGFYEYQQLDYDINQVIDMQDYVMVTGD FYAQVLVDGQPISLKNRALCIWKKRGDEFKFFMYQGTPFTK
Sequences:
>Translated_121_residues MEQQISELEQQRFNYLLNKQYDEFAALCDADLRYVHSSGAIDDLSSYLQKLKSGFYEYQQLDYDINQVIDMQDYVMVTGD FYAQVLVDGQPISLKNRALCIWKKRGDEFKFFMYQGTPFTK >Mature_121_residues MEQQISELEQQRFNYLLNKQYDEFAALCDADLRYVHSSGAIDDLSSYLQKLKSGFYEYQQLDYDINQVIDMQDYVMVTGD FYAQVLVDGQPISLKNRALCIWKKRGDEFKFFMYQGTPFTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14317; Mature: 14317
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQQISELEQQRFNYLLNKQYDEFAALCDADLRYVHSSGAIDDLSSYLQKLKSGFYEYQQ CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LDYDINQVIDMQDYVMVTGDFYAQVLVDGQPISLKNRALCIWKKRGDEFKFFMYQGTPFT CCCCHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCC K C >Mature Secondary Structure MEQQISELEQQRFNYLLNKQYDEFAALCDADLRYVHSSGAIDDLSSYLQKLKSGFYEYQQ CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LDYDINQVIDMQDYVMVTGDFYAQVLVDGQPISLKNRALCIWKKRGDEFKFFMYQGTPFT CCCCHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA