| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652801
Identifier: 148652801
GI number: 148652801
Start: 1180690
End: 1181343
Strand: Direct
Name: 148652801
Synonym: PsycPRwf_0994
Alternate gene names: NA
Gene position: 1180690-1181343 (Clockwise)
Preceding gene: 148652800
Following gene: 148652802
Centisome position: 39.63
GC content: 43.73
Gene sequence:
>654_bases ATGACGACACTGTTTATGGTGCAGCTTGGCGCCACGCCAAAGGGTCGGCTGATTGAACAGCACGACATGTTCTTTGGGGT AGCAGATAAGGTAGGCGATTTGATAGATGCGATAAATGCCCACTGGCCTGCGGTCAAGAACAAATGGCATATCGACTCTT ATCGTAGCGTCACTACGGTTATTAACCCTGATGGCAGTGCTTATCATATTGAGTGGCAGGACGATAATACTGCAGAAAAA GATAATATAAACTCGTCAATTAAGAGTAACCAGAGCACAGATAACGCTTCCGATTTAAAACTGTTTTTTATTAATTTGGG TGGCTATCAAGAGGGCAGTATCGAAGAGTTTCATTACAAAATGCTGGTGGTTGCACCCACTCAAGCTACAGCAATGAAAG CGGCCGCCACGACCGAGTTTTATAAACACTACAGCTATAATGATGACGACGTTCCCTTCAATGCCGCCTCACACATTGAT AATAAACATCAGGTGGATGTCGATGATATCTATGATGTTGATGGTCTGCTAAGTGTTGGTCGACTGGTTATCACGCCTAT ACCTGTTGGTTCTATTGACTTTGATGAGGCTGTAGAGGATAAAAATTATGTCGGCTACCTCAGTCTCAAGACGCTTAAAA GTTTGGCGTTGTGA
Upstream 100 bases:
>100_bases CAGTGGCTGTGGTGAAGCAGTTCTTGCGAGACACCAAATCTGACTATACTAAGTCGTTTAACTAAATAAATCATCCAGTA TTGAGTTAAAGGGGCAGAGT
Downstream 100 bases:
>100_bases GTTTGGCATTATAAGTTAATTTCTCGTAATCAAGGGCAACTCAAAAATAACCGCTCAGCAGTGTTATAATAAACCCTTGA TTGTGCGGCCATTACCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTTLFMVQLGATPKGRLIEQHDMFFGVADKVGDLIDAINAHWPAVKNKWHIDSYRSVTTVINPDGSAYHIEWQDDNTAEK DNINSSIKSNQSTDNASDLKLFFINLGGYQEGSIEEFHYKMLVVAPTQATAMKAAATTEFYKHYSYNDDDVPFNAASHID NKHQVDVDDIYDVDGLLSVGRLVITPIPVGSIDFDEAVEDKNYVGYLSLKTLKSLAL
Sequences:
>Translated_217_residues MTTLFMVQLGATPKGRLIEQHDMFFGVADKVGDLIDAINAHWPAVKNKWHIDSYRSVTTVINPDGSAYHIEWQDDNTAEK DNINSSIKSNQSTDNASDLKLFFINLGGYQEGSIEEFHYKMLVVAPTQATAMKAAATTEFYKHYSYNDDDVPFNAASHID NKHQVDVDDIYDVDGLLSVGRLVITPIPVGSIDFDEAVEDKNYVGYLSLKTLKSLAL >Mature_216_residues TTLFMVQLGATPKGRLIEQHDMFFGVADKVGDLIDAINAHWPAVKNKWHIDSYRSVTTVINPDGSAYHIEWQDDNTAEKD NINSSIKSNQSTDNASDLKLFFINLGGYQEGSIEEFHYKMLVVAPTQATAMKAAATTEFYKHYSYNDDDVPFNAASHIDN KHQVDVDDIYDVDGLLSVGRLVITPIPVGSIDFDEAVEDKNYVGYLSLKTLKSLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24196; Mature: 24065
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLFMVQLGATPKGRLIEQHDMFFGVADKVGDLIDAINAHWPAVKNKWHIDSYRSVTTV CCEEEEEEECCCCCCCEEEHHHHEEEHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEE INPDGSAYHIEWQDDNTAEKDNINSSIKSNQSTDNASDLKLFFINLGGYQEGSIEEFHYK ECCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEE MLVVAPTQATAMKAAATTEFYKHYSYNDDDVPFNAASHIDNKHQVDVDDIYDVDGLLSVG EEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHHHCCHHHHHHCC RLVITPIPVGSIDFDEAVEDKNYVGYLSLKTLKSLAL EEEEECCCCCCCCHHHHHCCCCEEEEEEHHHHHHHCC >Mature Secondary Structure TTLFMVQLGATPKGRLIEQHDMFFGVADKVGDLIDAINAHWPAVKNKWHIDSYRSVTTV CEEEEEEECCCCCCCEEEHHHHEEEHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEE INPDGSAYHIEWQDDNTAEKDNINSSIKSNQSTDNASDLKLFFINLGGYQEGSIEEFHYK ECCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEE MLVVAPTQATAMKAAATTEFYKHYSYNDDDVPFNAASHIDNKHQVDVDDIYDVDGLLSVG EEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHHHCCHHHHHHCC RLVITPIPVGSIDFDEAVEDKNYVGYLSLKTLKSLAL EEEEECCCCCCCCHHHHHCCCCEEEEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA