| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is lysN [H]
Identifier: 148652709
GI number: 148652709
Start: 1073165
End: 1074364
Strand: Direct
Name: lysN [H]
Synonym: PsycPRwf_0902
Alternate gene names: 148652709
Gene position: 1073165-1074364 (Clockwise)
Preceding gene: 148652708
Following gene: 148652713
Centisome position: 36.02
GC content: 44.67
Gene sequence:
>1200_bases ATGCAGTACGAGTTTTCAGAGGTGATTAACGGATTAAAACCCTCATTTATCCGCGAAATATTAAAGTTAACGGTTAAACC AGAGATTATCTCCTTCGCCGGTGGTTTGCCAGATCCTACCTTGTTCCCACATCAGACCATCAAAGATGCCAGCAATGCCA TGTTTGACCGCCAAGACAATGGTATCTTTCAGTATACCACCACTGAAGGTCACTTAGGCCTGCGCCAGTGGATTGCTAAG CGTTTCTCAGATGCTCATGATGTACAAGTCGATGCAGATCAAGTGATGATTGTGTCCGGCTCACAGCAAGCACTAGATTT ATTTGGCAAAATCTATATCAACCCACAAGATGGCGTGGTAATGGAGGCGCCGACCTATCTTGGGGCAATCCAAGCTTTTC GTATGTACCAGCCTGAGTTTAAAGAAGTTGAACTGTTAGAGGATGGAATAGATACCGATCAGTTTCGCACTACCATGACG CAGTCAGACAGTAAGTTTTTTTATGGTATTCCAAACTTCCAAAACCCAACGGGTTTAACTTATTCTGCTGATAAGCGTCA GCAAGTGGCCGATATCTTACAAGATAGCGGCAAGCTGATGCTAGAAGATGACCCTTATGGCGCCTTATTGTTTGATGATC CAAATACTCAAGGTATGACCACTCGTCCGATTTATGCACTGGCTCCTGAGCATGTAGTGTATATGGGCTCGTTCTCTAAA GTATTTGTCCCCGGATTTAGATTGGGATGGGTAATTGCACCTAAGCCTGTGTTGGCTAAAATGGTCATCGCCAAGCAAGC AGCTGACTTGCACACCAACTCATTTGTGCAGGAGCTGCTGTATCAGTATGTCACCACCAATGACTTAGATGCCCACATTG ATGTCATTCGCCAGACCTATTCTGCTAAGAAAAGCTGCATGGTAGAGGCCATTCATACTTATCTAGGCGATGAGGTTGAG ATGGCACCAGCCAATGGCGGTATGTTTATTTGGGTACGTGTACCGGGCGTGGCCGTGATGGATCTGCTTAAATATGCCAT TGATAATAATGTCGCTTACGTGCCAGGTGAAGCCTTCTCATTGTCAGGTGAATATAAAGACTATATGCGTCTAAACTTCA CAAGCTTAGATGATGAGCAGATTATTGAAGGAATTAAGCGCTTAAAAGCAGCACTGGATGCTTATCGTGCGGCTCAATAA
Upstream 100 bases:
>100_bases ATGATAATAATTTACGTCAAATACTGGCCCAAAAAAGCACGCTAGCAATTATAAGCCCATCTACGCCAGTCAACCCAACT TGTTATAAAAAGAGAGCGAT
Downstream 100 bases:
>100_bases TATCGCAATAATTCATTGAGTCAGTCGTAATTTTGCAGGTGCAGACAGTAAAAAGTCACCGATTAATCGGTGACTTTTTT AACGGCTATTTTTACTGCTT
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MQYEFSEVINGLKPSFIREILKLTVKPEIISFAGGLPDPTLFPHQTIKDASNAMFDRQDNGIFQYTTTEGHLGLRQWIAK RFSDAHDVQVDADQVMIVSGSQQALDLFGKIYINPQDGVVMEAPTYLGAIQAFRMYQPEFKEVELLEDGIDTDQFRTTMT QSDSKFFYGIPNFQNPTGLTYSADKRQQVADILQDSGKLMLEDDPYGALLFDDPNTQGMTTRPIYALAPEHVVYMGSFSK VFVPGFRLGWVIAPKPVLAKMVIAKQAADLHTNSFVQELLYQYVTTNDLDAHIDVIRQTYSAKKSCMVEAIHTYLGDEVE MAPANGGMFIWVRVPGVAVMDLLKYAIDNNVAYVPGEAFSLSGEYKDYMRLNFTSLDDEQIIEGIKRLKAALDAYRAAQ
Sequences:
>Translated_399_residues MQYEFSEVINGLKPSFIREILKLTVKPEIISFAGGLPDPTLFPHQTIKDASNAMFDRQDNGIFQYTTTEGHLGLRQWIAK RFSDAHDVQVDADQVMIVSGSQQALDLFGKIYINPQDGVVMEAPTYLGAIQAFRMYQPEFKEVELLEDGIDTDQFRTTMT QSDSKFFYGIPNFQNPTGLTYSADKRQQVADILQDSGKLMLEDDPYGALLFDDPNTQGMTTRPIYALAPEHVVYMGSFSK VFVPGFRLGWVIAPKPVLAKMVIAKQAADLHTNSFVQELLYQYVTTNDLDAHIDVIRQTYSAKKSCMVEAIHTYLGDEVE MAPANGGMFIWVRVPGVAVMDLLKYAIDNNVAYVPGEAFSLSGEYKDYMRLNFTSLDDEQIIEGIKRLKAALDAYRAAQ >Mature_399_residues MQYEFSEVINGLKPSFIREILKLTVKPEIISFAGGLPDPTLFPHQTIKDASNAMFDRQDNGIFQYTTTEGHLGLRQWIAK RFSDAHDVQVDADQVMIVSGSQQALDLFGKIYINPQDGVVMEAPTYLGAIQAFRMYQPEFKEVELLEDGIDTDQFRTTMT QSDSKFFYGIPNFQNPTGLTYSADKRQQVADILQDSGKLMLEDDPYGALLFDDPNTQGMTTRPIYALAPEHVVYMGSFSK VFVPGFRLGWVIAPKPVLAKMVIAKQAADLHTNSFVQELLYQYVTTNDLDAHIDVIRQTYSAKKSCMVEAIHTYLGDEVE MAPANGGMFIWVRVPGVAVMDLLKYAIDNNVAYVPGEAFSLSGEYKDYMRLNFTSLDDEQIIEGIKRLKAALDAYRAAQ
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=400, Percent_Identity=26.75, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI33469970, Length=400, Percent_Identity=26.75, Blast_Score=153, Evalue=3e-37, Organism=Escherichia coli, GI1787710, Length=379, Percent_Identity=27.7044854881267, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI1790797, Length=340, Percent_Identity=26.7647058823529, Blast_Score=119, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6321236, Length=486, Percent_Identity=23.6625514403292, Blast_Score=106, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6321000, Length=438, Percent_Identity=22.6027397260274, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6321929, Length=286, Percent_Identity=23.7762237762238, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI21356535, Length=405, Percent_Identity=25.9259259259259, Blast_Score=129, Evalue=4e-30,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 44822; Mature: 44822
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYEFSEVINGLKPSFIREILKLTVKPEIISFAGGLPDPTLFPHQTIKDASNAMFDRQDN CCCCHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC GIFQYTTTEGHLGLRQWIAKRFSDAHDVQVDADQVMIVSGSQQALDLFGKIYINPQDGVV CEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCEEEEECCHHHHHCEEEEEECCCCCEE MEAPTYLGAIQAFRMYQPEFKEVELLEDGIDTDQFRTTMTQSDSKFFYGIPNFQNPTGLT EECCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCE YSADKRQQVADILQDSGKLMLEDDPYGALLFDDPNTQGMTTRPIYALAPEHVVYMGSFSK ECCHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCEECCEEEECCCEEEEECCCCC VFVPGFRLGWVIAPKPVLAKMVIAKQAADLHTNSFVQELLYQYVTTNDLDAHIDVIRQTY EECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SAKKSCMVEAIHTYLGDEVEMAPANGGMFIWVRVPGVAVMDLLKYAIDNNVAYVPGEAFS HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCEEECCCCCEE LSGEYKDYMRLNFTSLDDEQIIEGIKRLKAALDAYRAAQ CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQYEFSEVINGLKPSFIREILKLTVKPEIISFAGGLPDPTLFPHQTIKDASNAMFDRQDN CCCCHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCC GIFQYTTTEGHLGLRQWIAKRFSDAHDVQVDADQVMIVSGSQQALDLFGKIYINPQDGVV CEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCEEEEECCHHHHHCEEEEEECCCCCEE MEAPTYLGAIQAFRMYQPEFKEVELLEDGIDTDQFRTTMTQSDSKFFYGIPNFQNPTGLT EECCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCE YSADKRQQVADILQDSGKLMLEDDPYGALLFDDPNTQGMTTRPIYALAPEHVVYMGSFSK ECCHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCEECCEEEECCCEEEEECCCCC VFVPGFRLGWVIAPKPVLAKMVIAKQAADLHTNSFVQELLYQYVTTNDLDAHIDVIRQTY EECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SAKKSCMVEAIHTYLGDEVEMAPANGGMFIWVRVPGVAVMDLLKYAIDNNVAYVPGEAFS HHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCEEECCCCCEE LSGEYKDYMRLNFTSLDDEQIIEGIKRLKAALDAYRAAQ CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA