Click here to switch to the map view.

The map label for this gene is bigR [H]

Identifier: 148652663

GI number: 148652663

Start: 1011600

End: 1012001

Strand: Direct

Name: bigR [H]

Synonym: PsycPRwf_0854

Alternate gene names: 148652663

Gene position: 1011600-1012001 (Clockwise)

Preceding gene: 148652662

Following gene: 148652664

Centisome position: 33.96

GC content: 45.52

Gene sequence:

>402_bases
GTGTCAAATGCAATCGAACATGAGGCATCCAAACAAGATGACCGTACCAACGTGCTTAACCTAGATACAGGCGAATTAGA
TACAAGCAAATTAGATATAGCAGCGCTCAAGGCTTCAGCGACCAAAGCCTCAGCCTTACTTAAGTCGTTATCGCATTCAG
ATCGCTTATTGTTGTTGTGTCAGTTGGTGGAATCAGAAGCTTGTGTGCGTGACTTAGAGCAGACAACGGGTATTAAGCAG
CCCAGTCTATCGCAGCAATTGGGTGTATTGCGTGATAATGGCTTGGTCAATACCCGCCGTGAGGGTAGGCAGATTTTTTA
TAGTATTGCCAGTGAGGATGCGCTGGCCGTCATGCAAGTTTTGTATCAGCGCTTTTGTGCTACTGATGGCGATACTAAAT
AA

Upstream 100 bases:

>100_bases
ATGCAATAATAGTATATAAAATTATATAATATATTTCTGTGTAACCTGAGTGGGTTGTATATAATACCTCTTTGATTGGT
CTACGAAGGAGATATTAACT

Downstream 100 bases:

>100_bases
GCTTTAGGTCAATAGACGCTATGGCAGTCAGTTCAACATGAGCTCAAGTGCGATGACTGGTAATACAGTGCAATACAGAT
AATTAGGAGTGTGAAAATGC

Product: regulatory protein ArsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSNAIEHEASKQDDRTNVLNLDTGELDTSKLDIAALKASATKASALLKSLSHSDRLLLLCQLVESEACVRDLEQTTGIKQ
PSLSQQLGVLRDNGLVNTRREGRQIFYSIASEDALAVMQVLYQRFCATDGDTK

Sequences:

>Translated_133_residues
MSNAIEHEASKQDDRTNVLNLDTGELDTSKLDIAALKASATKASALLKSLSHSDRLLLLCQLVESEACVRDLEQTTGIKQ
PSLSQQLGVLRDNGLVNTRREGRQIFYSIASEDALAVMQVLYQRFCATDGDTK
>Mature_132_residues
SNAIEHEASKQDDRTNVLNLDTGELDTSKLDIAALKASATKASALLKSLSHSDRLLLLCQLVESEACVRDLEQTTGIKQP
SLSQQLGVLRDNGLVNTRREGRQIFYSIASEDALAVMQVLYQRFCATDGDTK

Specific function: Represses an operon that comprises at least itself and blh. Binds to a palindromic AT-rich sequence spanning the -10 region of the blh promoter and blocks transcription of the operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789021, Length=96, Percent_Identity=39.5833333333333, Blast_Score=73, Evalue=6e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 14583; Mature: 14451

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAIEHEASKQDDRTNVLNLDTGELDTSKLDIAALKASATKASALLKSLSHSDRLLLLC
CCCCCCHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
QLVESEACVRDLEQTTGIKQPSLSQQLGVLRDNGLVNTRREGRQIFYSIASEDALAVMQV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
LYQRFCATDGDTK
HHHHHHCCCCCCC
>Mature Secondary Structure 
SNAIEHEASKQDDRTNVLNLDTGELDTSKLDIAALKASATKASALLKSLSHSDRLLLLC
CCCCCHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
QLVESEACVRDLEQTTGIKQPSLSQQLGVLRDNGLVNTRREGRQIFYSIASEDALAVMQV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
LYQRFCATDGDTK
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]