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The map label for this gene is yadH [H]

Identifier: 148652419

GI number: 148652419

Start: 729816

End: 730631

Strand: Direct

Name: yadH [H]

Synonym: PsycPRwf_0607

Alternate gene names: 148652419

Gene position: 729816-730631 (Clockwise)

Preceding gene: 148652418

Following gene: 148652420

Centisome position: 24.5

GC content: 43.01

Gene sequence:

>816_bases
ATGAGTCACAACACCAACACAGCAACTCGCCCACAGGATGGGTTAACAGTTGCTCAAAAGTGGATTGCTTTTCGCACTAT
TTTGGTAAAAGAAGTACGCCGTATTTTACGTATTTGGCCCCAAACGCTGCTGCCTCCGGTGATTACCATGAGCTTGTATT
TTGTCATCTTCGGTAAGATGATCGGCTCCCGCGTTGGCGAGATGGGCGGGGTGCCTTATATGCAGTTTATTGTGCCAGGC
CTGATTATGATGTCGGTCATTACCAACAGCTACTCAAACGTGGTCTCAAGCTTTTTTAGCGCCAAATTTACGTCAAGTAT
TGAAGAGCTTTTGGTATCTCCGGTATCTAAGCATTCCATATTATTAGGCTATGTTGGTGGCGGTGTTTTCCGTGGTTTAA
TGATTGCCATTATTGTGTCTATTGTGGCGCAATTTTTTACCAACTTAGGCATTGAGCACTGGTTTGTGATGATATTTACG
GTGCTTGGTACCTCGGTGCTATTTTCATTGGGTGGTTTTATTAACGCAGTGTTTGCCCGCTCTTTTGATGACATCTCAAT
TATTCCAAGCTTTGTGCTCACCCCGTTAACTTATTTGGGCGGTGTGTTTTATTCACTGGAGAATTTGTCACCTTTTTGGC
AAAACGTTTCGCTACTCAACCCTATTGTGTATATGGTGAACTCGTTTCGATATGGCATCTTAGGGTATTCAGATGTGAAT
GTGTGGGCATCCATGGCGGCCATATTCGTCTTTTGTTTGATTTTTTATGTCATCGCTTATCGTTTATTAGATAACGGCTC
ACGCTTAAGACTGTAA

Upstream 100 bases:

>100_bases
TGTCTAGTATGCGTAATAAAGCCAACCGTTTAGAGGAATTATTTATGCGCTTAGTAGAGCAGGGTGTGGCGGGCAAAGAC
AGCATGAAGGAGGTGGGACT

Downstream 100 bases:

>100_bases
GCCTAAGACAGCTTGTCAATTATCAGGCATATTTTGAATCAAATGCCGTATTTGCTTTGGCGTAACCTGTATTAACCCAA
GCTTAAACCGCTCAAACCTC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSHNTNTATRPQDGLTVAQKWIAFRTILVKEVRRILRIWPQTLLPPVITMSLYFVIFGKMIGSRVGEMGGVPYMQFIVPG
LIMMSVITNSYSNVVSSFFSAKFTSSIEELLVSPVSKHSILLGYVGGGVFRGLMIAIIVSIVAQFFTNLGIEHWFVMIFT
VLGTSVLFSLGGFINAVFARSFDDISIIPSFVLTPLTYLGGVFYSLENLSPFWQNVSLLNPIVYMVNSFRYGILGYSDVN
VWASMAAIFVFCLIFYVIAYRLLDNGSRLRL

Sequences:

>Translated_271_residues
MSHNTNTATRPQDGLTVAQKWIAFRTILVKEVRRILRIWPQTLLPPVITMSLYFVIFGKMIGSRVGEMGGVPYMQFIVPG
LIMMSVITNSYSNVVSSFFSAKFTSSIEELLVSPVSKHSILLGYVGGGVFRGLMIAIIVSIVAQFFTNLGIEHWFVMIFT
VLGTSVLFSLGGFINAVFARSFDDISIIPSFVLTPLTYLGGVFYSLENLSPFWQNVSLLNPIVYMVNSFRYGILGYSDVN
VWASMAAIFVFCLIFYVIAYRLLDNGSRLRL
>Mature_270_residues
SHNTNTATRPQDGLTVAQKWIAFRTILVKEVRRILRIWPQTLLPPVITMSLYFVIFGKMIGSRVGEMGGVPYMQFIVPGL
IMMSVITNSYSNVVSSFFSAKFTSSIEELLVSPVSKHSILLGYVGGGVFRGLMIAIIVSIVAQFFTNLGIEHWFVMIFTV
LGTSVLFSLGGFINAVFARSFDDISIIPSFVLTPLTYLGGVFYSLENLSPFWQNVSLLNPIVYMVNSFRYGILGYSDVNV
WASMAAIFVFCLIFYVIAYRLLDNGSRLRL

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=250, Percent_Identity=58.8, Blast_Score=304, Evalue=5e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 30287; Mature: 30156

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SHNTNTATRPQDGLTVAQKWIAFRTILVKEVRRILRIWPQTLLPPVITMSLYFVIFGKM
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSRVGEMGGVPYMQFIVPGLIMMSVITNSYSNVVSSFFSAKFTSSIEELLVSPVSKHSI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LLGYVGGGVFRGLMIAIIVSIVAQFFTNLGIEHWFVMIFTVLGTSVLFSLGGFINAVFAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFDDISIIPSFVLTPLTYLGGVFYSLENLSPFWQNVSLLNPIVYMVNSFRYGILGYSDVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VWASMAAIFVFCLIFYVIAYRLLDNGSRLRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]