| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is pncB [H]
Identifier: 148652393
GI number: 148652393
Start: 699279
End: 700502
Strand: Direct
Name: pncB [H]
Synonym: PsycPRwf_0581
Alternate gene names: 148652393
Gene position: 699279-700502 (Clockwise)
Preceding gene: 148652392
Following gene: 148652394
Centisome position: 23.47
GC content: 45.42
Gene sequence:
>1224_bases ATGACAAAACCTATTACTCCAATAATCACCTCGTTGCTTGATAATGACTTGTACAAATTTACCATGCTACAAGCCATGCT ACATCAGTTCCCACAAACCCATGGTGTGTACCGCTTTCGCTGCCGCAATTATCAAGACACCGCTTATCCGCTGGCGGATA TTAAGCCGGCTCTAGAGGCTCAGCTTGATCACTTGTGTCAGCTAAGCTTTACCCAAGATGAGCTGGATTATCTGAGTGGT CTGCGTTTTATTAGAGCGGATTTTGTAGATTATCTGGAGCTATTTAAGCTAAAGCGTCGCCATATTCACGTGAGTATTGA TGACAAGAACCGCTTAAATATCGATATCGAAGGCCCGATGATTCAGGCGATGTTCTTTGAAGTGTTCGTCTTGGCCATCG TCAATGAGCTGTATTATCAGCAGCTGACCACGCCTAAGATTATTGAAGAGGGAGAAAGACGTCTGCAGCAAAAAGTAGAT TTGTTGCAACGTTACGCTGGCGAGCAAAGCCGCAGCATGCCGCCGTTTATCATCGCTGATTTTGGCACCCGTCGCCGTTT TAGCAAGGCCTGGCATACCCATGTGGTTGAAACCTTGCATAAAGCGGCACCGAGTATCGTACGCGGTACCTCTAATGTGT ATTTGGCCAAAAAATTAAAAATCACGCCGATTGGCACCATGGCGCACGAATTTATGCAGGCCTTCCAAGCGCTTGATGTG CGTTTGCGTGACTCACAAAAAGCAGCACTTGAGGCGTGGGTGCATGAGTATCGAGGCGACTTAGGTATTGCTTTAACCGA TGTGGTGGGGATGGATGCCTTTTTACGTGATTTTGATCTGTACTTTGCCAAATTGTTTGATGGACTGCGTCATGATAGTG GCGACCCTTATGCGTGGGGCGATAAGGCAATTAACCATTACCGCCAGCTTAAGATTGATCCTAAGACCAAAGTACTTACC TTCAGTGACGGCCTGGATATTAAAAAAGCATGGCAGTTGCATGAGTATTTTAAAGAGCGTATTCAGACAAGCTTTGGTAT CGGTACCAATTTGACCAATGACATGGGACTCACCCAACTAAATATCGTATTAAAGCTGGTGGAATGTAATGGTCAGCCCG TGGCCAAGCTGTCTGATAGCCCAGGCAAAACCATGATCCACAATGACACCTATTTGGCCTATTTGCGTCAGGTATTTGAT ATAAAAGAAGAACAAGACCAATAA
Upstream 100 bases:
>100_bases TAAATGACAATGCCAAATAGCATTAATGGGCCGAACAAGTCATAATATTACGATGAATAAGATTGTAAAGACTGGCTGAT TTTAAATTTTGAGCGAAATT
Downstream 100 bases:
>100_bases GCTATGCGCACCACTTTTAGCAAGCTTACGCGTTAAAGATAGGCACAAGCTTTAACACTTAACTTAGCGACAGGGCTCTT ATGGGCCCTTTTTTTATGTC
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTKPITPIITSLLDNDLYKFTMLQAMLHQFPQTHGVYRFRCRNYQDTAYPLADIKPALEAQLDHLCQLSFTQDELDYLSG LRFIRADFVDYLELFKLKRRHIHVSIDDKNRLNIDIEGPMIQAMFFEVFVLAIVNELYYQQLTTPKIIEEGERRLQQKVD LLQRYAGEQSRSMPPFIIADFGTRRRFSKAWHTHVVETLHKAAPSIVRGTSNVYLAKKLKITPIGTMAHEFMQAFQALDV RLRDSQKAALEAWVHEYRGDLGIALTDVVGMDAFLRDFDLYFAKLFDGLRHDSGDPYAWGDKAINHYRQLKIDPKTKVLT FSDGLDIKKAWQLHEYFKERIQTSFGIGTNLTNDMGLTQLNIVLKLVECNGQPVAKLSDSPGKTMIHNDTYLAYLRQVFD IKEEQDQ
Sequences:
>Translated_407_residues MTKPITPIITSLLDNDLYKFTMLQAMLHQFPQTHGVYRFRCRNYQDTAYPLADIKPALEAQLDHLCQLSFTQDELDYLSG LRFIRADFVDYLELFKLKRRHIHVSIDDKNRLNIDIEGPMIQAMFFEVFVLAIVNELYYQQLTTPKIIEEGERRLQQKVD LLQRYAGEQSRSMPPFIIADFGTRRRFSKAWHTHVVETLHKAAPSIVRGTSNVYLAKKLKITPIGTMAHEFMQAFQALDV RLRDSQKAALEAWVHEYRGDLGIALTDVVGMDAFLRDFDLYFAKLFDGLRHDSGDPYAWGDKAINHYRQLKIDPKTKVLT FSDGLDIKKAWQLHEYFKERIQTSFGIGTNLTNDMGLTQLNIVLKLVECNGQPVAKLSDSPGKTMIHNDTYLAYLRQVFD IKEEQDQ >Mature_406_residues TKPITPIITSLLDNDLYKFTMLQAMLHQFPQTHGVYRFRCRNYQDTAYPLADIKPALEAQLDHLCQLSFTQDELDYLSGL RFIRADFVDYLELFKLKRRHIHVSIDDKNRLNIDIEGPMIQAMFFEVFVLAIVNELYYQQLTTPKIIEEGERRLQQKVDL LQRYAGEQSRSMPPFIIADFGTRRRFSKAWHTHVVETLHKAAPSIVRGTSNVYLAKKLKITPIGTMAHEFMQAFQALDVR LRDSQKAALEAWVHEYRGDLGIALTDVVGMDAFLRDFDLYFAKLFDGLRHDSGDPYAWGDKAINHYRQLKIDPKTKVLTF SDGLDIKKAWQLHEYFKERIQTSFGIGTNLTNDMGLTQLNIVLKLVECNGQPVAKLSDSPGKTMIHNDTYLAYLRQVFDI KEEQDQ
Specific function: NAD biosynthesis; nicotinamide to NaMN; second step. [C]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Escherichia coli, GI1787162, Length=403, Percent_Identity=44.9131513647643, Blast_Score=332, Evalue=3e-92, Organism=Saccharomyces cerevisiae, GI6324783, Length=411, Percent_Identity=29.9270072992701, Blast_Score=177, Evalue=3e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006406 - InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 47177; Mature: 47046
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPITPIITSLLDNDLYKFTMLQAMLHQFPQTHGVYRFRCRNYQDTAYPLADIKPALEA CCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCCCCCHHHCCHHHHH QLDHLCQLSFTQDELDYLSGLRFIRADFVDYLELFKLKRRHIHVSIDDKNRLNIDIEGPM HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCHH IQAMFFEVFVLAIVNELYYQQLTTPKIIEEGERRLQQKVDLLQRYAGEQSRSMPPFIIAD HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC FGTRRRFSKAWHTHVVETLHKAAPSIVRGTSNVYLAKKLKITPIGTMAHEFMQAFQALDV CCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHH RLRDSQKAALEAWVHEYRGDLGIALTDVVGMDAFLRDFDLYFAKLFDGLRHDSGDPYAWG HHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DKAINHYRQLKIDPKTKVLTFSDGLDIKKAWQLHEYFKERIQTSFGIGTNLTNDMGLTQL HHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH NIVLKLVECNGQPVAKLSDSPGKTMIHNDTYLAYLRQVFDIKEEQDQ HHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKPITPIITSLLDNDLYKFTMLQAMLHQFPQTHGVYRFRCRNYQDTAYPLADIKPALEA CCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCCCCCHHHCCHHHHH QLDHLCQLSFTQDELDYLSGLRFIRADFVDYLELFKLKRRHIHVSIDDKNRLNIDIEGPM HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCHH IQAMFFEVFVLAIVNELYYQQLTTPKIIEEGERRLQQKVDLLQRYAGEQSRSMPPFIIAD HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC FGTRRRFSKAWHTHVVETLHKAAPSIVRGTSNVYLAKKLKITPIGTMAHEFMQAFQALDV CCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHH RLRDSQKAALEAWVHEYRGDLGIALTDVVGMDAFLRDFDLYFAKLFDGLRHDSGDPYAWG HHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DKAINHYRQLKIDPKTKVLTFSDGLDIKKAWQLHEYFKERIQTSFGIGTNLTNDMGLTQL HHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH NIVLKLVECNGQPVAKLSDSPGKTMIHNDTYLAYLRQVFDIKEEQDQ HHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA