| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is blh [H]
Identifier: 148652382
GI number: 148652382
Start: 685307
End: 686194
Strand: Direct
Name: blh [H]
Synonym: PsycPRwf_0570
Alternate gene names: 148652382
Gene position: 685307-686194 (Clockwise)
Preceding gene: 148652381
Following gene: 148652383
Centisome position: 23.0
GC content: 46.28
Gene sequence:
>888_bases ATGGAGATTAAATCATTCTTGCATGAGGACACCGAAACGTACACGCACGTATTAATCGATACCGGCAACAAGGTGTGTGC CATTATAGATCCTGTGCTTGACTATGACTTTAAATCGGGTCACACCAGCACCAAGTCAGCTGAGCAAGTGGTGCAGTTTA TTAATCAGCAACAGCTTAACGCTGCCTATATTATTGAGACCCATGCTCATGCAGACCATTTATCAGCGGCTCAATATTTA AAGCAGCAGCTGGGCGCACAGCTGGTAATAGGCAAACCCATTACGGAAGTGCAAAAGATCTTTAAACACGTGTTTAACTT GGATATGGGCTTTAAAACTGATGCCAGTCAGTTCGATAAGTTAACTGAAGAGGGCACCCAGTTTATGCTCGGTGATATTG AGCTGACTGTGATGCATGTGCCTGGACATACGCCAGCAGACATGGCCTATATTGCCAAAAATACGGCAGATACCACGCAG CCATTGGCCATATTTGTAGGGGATACTTTGTTTGCTCCAGATGTTGGCACCGCACGTGTTGATTTTCCGGGCGGTGATGT TGATGCGTTATACGAATCTATCCAAAAGATTCTAGCGCTGCCTGAGGACACGGTCATTTATCTTTGTCATGACTATCCAC CACAAGACAGAACACATTCACCAGTGACCACGGTTGGGGCGCAAAAAGCGCATAATATCCATGTGCACCAAGGCATTAGT CAGGCGCAATTTGCAAAAATGCGCACTGAACGGGATGCCACCTTGCAGATGCCTCGATTGATTATCCCCTCTGTACAAGT CAATATCCAGGCAGGACATCTGCCTGAGCCAGAAGACAACGGGGTGCGTTATCTTAAGGTGCCGCTAAATTTATTAGGAC AGTCATAG
Upstream 100 bases:
>100_bases ACTATATAATATTTATTTATATAGTATAATGATAGGTATAGTAAGCGTAACGCTGCGCTTAGCCATTTATAAATCAACAC CACAAAAGGAGCGCCGGACA
Downstream 100 bases:
>100_bases CCATCAATCATGGCCACCAATATGCGCTGTCATCATGCAGGGTAGCGCTCATAGACAGTACACGACATACAAGCATGGAC AGAATAATAAATAGCGGGGG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MEIKSFLHEDTETYTHVLIDTGNKVCAIIDPVLDYDFKSGHTSTKSAEQVVQFINQQQLNAAYIIETHAHADHLSAAQYL KQQLGAQLVIGKPITEVQKIFKHVFNLDMGFKTDASQFDKLTEEGTQFMLGDIELTVMHVPGHTPADMAYIAKNTADTTQ PLAIFVGDTLFAPDVGTARVDFPGGDVDALYESIQKILALPEDTVIYLCHDYPPQDRTHSPVTTVGAQKAHNIHVHQGIS QAQFAKMRTERDATLQMPRLIIPSVQVNIQAGHLPEPEDNGVRYLKVPLNLLGQS
Sequences:
>Translated_295_residues MEIKSFLHEDTETYTHVLIDTGNKVCAIIDPVLDYDFKSGHTSTKSAEQVVQFINQQQLNAAYIIETHAHADHLSAAQYL KQQLGAQLVIGKPITEVQKIFKHVFNLDMGFKTDASQFDKLTEEGTQFMLGDIELTVMHVPGHTPADMAYIAKNTADTTQ PLAIFVGDTLFAPDVGTARVDFPGGDVDALYESIQKILALPEDTVIYLCHDYPPQDRTHSPVTTVGAQKAHNIHVHQGIS QAQFAKMRTERDATLQMPRLIIPSVQVNIQAGHLPEPEDNGVRYLKVPLNLLGQS >Mature_295_residues MEIKSFLHEDTETYTHVLIDTGNKVCAIIDPVLDYDFKSGHTSTKSAEQVVQFINQQQLNAAYIIETHAHADHLSAAQYL KQQLGAQLVIGKPITEVQKIFKHVFNLDMGFKTDASQFDKLTEEGTQFMLGDIELTVMHVPGHTPADMAYIAKNTADTTQ PLAIFVGDTLFAPDVGTARVDFPGGDVDALYESIQKILALPEDTVIYLCHDYPPQDRTHSPVTTVGAQKAHNIHVHQGIS QAQFAKMRTERDATLQMPRLIIPSVQVNIQAGHLPEPEDNGVRYLKVPLNLLGQS
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=226, Percent_Identity=27.8761061946903, Blast_Score=81, Evalue=1e-15, Organism=Escherichia coli, GI1787158, Length=212, Percent_Identity=27.8301886792453, Blast_Score=75, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17538952, Length=263, Percent_Identity=26.9961977186312, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI221330176, Length=271, Percent_Identity=26.9372693726937, Blast_Score=92, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32679; Mature: 32679
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKSFLHEDTETYTHVLIDTGNKVCAIIDPVLDYDFKSGHTSTKSAEQVVQFINQQQLN CCHHHHHHHCCCCEEEEEEECCCEEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC AAYIIETHAHADHLSAAQYLKQQLGAQLVIGKPITEVQKIFKHVFNLDMGFKTDASQFDK EEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHH LTEEGTQFMLGDIELTVMHVPGHTPADMAYIAKNTADTTQPLAIFVGDTLFAPDVGTARV HHHHCCEEEEEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCEEEEECCEEECCCCCCEEE DFPGGDVDALYESIQKILALPEDTVIYLCHDYPPQDRTHSPVTTVGAQKAHNIHVHQGIS ECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCEEEHHCCCC QAQFAKMRTERDATLQMPRLIIPSVQVNIQAGHLPEPEDNGVRYLKVPLNLLGQS HHHHHHHHHCCCCHHCCCEEECCCEEEEEEECCCCCCCCCCEEEEEEEHHHCCCC >Mature Secondary Structure MEIKSFLHEDTETYTHVLIDTGNKVCAIIDPVLDYDFKSGHTSTKSAEQVVQFINQQQLN CCHHHHHHHCCCCEEEEEEECCCEEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC AAYIIETHAHADHLSAAQYLKQQLGAQLVIGKPITEVQKIFKHVFNLDMGFKTDASQFDK EEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHH LTEEGTQFMLGDIELTVMHVPGHTPADMAYIAKNTADTTQPLAIFVGDTLFAPDVGTARV HHHHCCEEEEEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCEEEEECCEEECCCCCCEEE DFPGGDVDALYESIQKILALPEDTVIYLCHDYPPQDRTHSPVTTVGAQKAHNIHVHQGIS ECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCEEEHHCCCC QAQFAKMRTERDATLQMPRLIIPSVQVNIQAGHLPEPEDNGVRYLKVPLNLLGQS HHHHHHHHHCCCCHHCCCEEECCCEEEEEEECCCCCCCCCCEEEEEEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]