| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is pgsA [H]
Identifier: 148652355
GI number: 148652355
Start: 646489
End: 647151
Strand: Direct
Name: pgsA [H]
Synonym: PsycPRwf_0543
Alternate gene names: 148652355
Gene position: 646489-647151 (Clockwise)
Preceding gene: 148652354
Following gene: 148652357
Centisome position: 21.7
GC content: 45.85
Gene sequence:
>663_bases ATGAGCCCAACACCTATACAGTCAAATTCACAATCTAGCATTTTTAATTTGCCTAATAACTTAACCATCGCCCGTATTGC GATGATTCCGTTGTTTGTGGCGATCGCCTATTGGCCGCCAGCCTTAGGTATTGGTGTGCCGATGATTTCGGACAATACCA TTGCCAATATTGGTATGAATATGGATGCGTTTAGTGACAGCATGCTGCGCCATTTGCTGTTGACTTTATTGTTTGTGTTG GCAGCCATTACCGACTGGTTAGATGGTTATTTGGCCCGAAAAATGAATATCGTATCCGCCTTTGGTCGCTTTTTAGACCC AGTGGCAGATAAGCTGATGGTGGCTGCGGCGCTGATTGTATTAGTGCAGTGGCATCCTAATATTATTATGGCCATTGCCG CCATTGTTATTATTTCACGTGAGATTGCGGTATCTGCGCTGCGTGAGTGGATGGCAGAGCTTGGGGCCCGTACTAGCGTG GCGGTGTCCTATGTGGGGAAGTTAAAAACTACGTTCCAAATGATAGCCATTACTGTGCTGCTGCTTAATGTAGAGTCACT GGAGTTGTTAGGCTATGGCTTGATGGTGGCAGCGGTTGTATTAACCTTATGGTCTATGATGATCTATATGCGCGCGGCTT GGCCTTATCTCAAACAAAACTAG
Upstream 100 bases:
>100_bases ATTAAGTTAACAATAGTGTTTAGATATGCCCGATTGGGGCTTACTAAATCTGGGTATAAATGCTAAGCTAGATGAAACCA AACGCTGTCTAAAAGTTATT
Downstream 100 bases:
>100_bases TCAATTACTTGCAGCTGAGCGATGAGTAAATCAAATCCACAGCTTACCAATCACTAAAAGTCCCAACCAATTGCAATTGG TTGGGGCTTTTTTGTTCATA
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSPTPIQSNSQSSIFNLPNNLTIARIAMIPLFVAIAYWPPALGIGVPMISDNTIANIGMNMDAFSDSMLRHLLLTLLFVL AAITDWLDGYLARKMNIVSAFGRFLDPVADKLMVAAALIVLVQWHPNIIMAIAAIVIISREIAVSALREWMAELGARTSV AVSYVGKLKTTFQMIAITVLLLNVESLELLGYGLMVAAVVLTLWSMMIYMRAAWPYLKQN
Sequences:
>Translated_220_residues MSPTPIQSNSQSSIFNLPNNLTIARIAMIPLFVAIAYWPPALGIGVPMISDNTIANIGMNMDAFSDSMLRHLLLTLLFVL AAITDWLDGYLARKMNIVSAFGRFLDPVADKLMVAAALIVLVQWHPNIIMAIAAIVIISREIAVSALREWMAELGARTSV AVSYVGKLKTTFQMIAITVLLLNVESLELLGYGLMVAAVVLTLWSMMIYMRAAWPYLKQN >Mature_219_residues SPTPIQSNSQSSIFNLPNNLTIARIAMIPLFVAIAYWPPALGIGVPMISDNTIANIGMNMDAFSDSMLRHLLLTLLFVLA AITDWLDGYLARKMNIVSAFGRFLDPVADKLMVAAALIVLVQWHPNIIMAIAAIVIISREIAVSALREWMAELGARTSVA VSYVGKLKTTFQMIAITVLLLNVESLELLGYGLMVAAVVLTLWSMMIYMRAAWPYLKQN
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=200, Percent_Identity=42.5, Blast_Score=147, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6320059, Length=140, Percent_Identity=32.8571428571429, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 24198; Mature: 24067
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTPIQSNSQSSIFNLPNNLTIARIAMIPLFVAIAYWPPALGIGVPMISDNTIANIGMN CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHCCCC MDAFSDSMLRHLLLTLLFVLAAITDWLDGYLARKMNIVSAFGRFLDPVADKLMVAAALIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVQWHPNIIMAIAAIVIISREIAVSALREWMAELGARTSVAVSYVGKLKTTFQMIAITVL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LLNVESLELLGYGLMVAAVVLTLWSMMIYMRAAWPYLKQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure SPTPIQSNSQSSIFNLPNNLTIARIAMIPLFVAIAYWPPALGIGVPMISDNTIANIGMN CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHCCCC MDAFSDSMLRHLLLTLLFVLAAITDWLDGYLARKMNIVSAFGRFLDPVADKLMVAAALIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVQWHPNIIMAIAAIVIISREIAVSALREWMAELGARTSVAVSYVGKLKTTFQMIAITVL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LLNVESLELLGYGLMVAAVVLTLWSMMIYMRAAWPYLKQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]