| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is yhiQ [C]
Identifier: 148652354
GI number: 148652354
Start: 645507
End: 646385
Strand: Direct
Name: yhiQ [C]
Synonym: PsycPRwf_0542
Alternate gene names: 148652354
Gene position: 645507-646385 (Clockwise)
Preceding gene: 148652353
Following gene: 148652355
Centisome position: 21.67
GC content: 49.72
Gene sequence:
>879_bases ATGATTTCGCCTATATCTTGTGTGACGCTTATTTATCCTCAGTCTATTGCTGAGCAGGCCTTGATACTGATTCAAGCGTT GCAGCAGCTGATAGTAGAGGCTAAGCTGCCGCTGAGTATCGAGGCGGTCGCCAGTGAGCAAAAGCTGACTCAAAAAATAC GCAAACAGCTCAGTCAGCAGTATCAGCAGCCGCTACTGGTGATAGATGACAAGCAGCAACTGACCTTGTTGACTAATGGG GTGAGTGTCTCGCCAGAATGGAATGGCCTACAGCGTCGAGTGGTCAGTGCCGGCAGAAAGTCAGAATTGCTGCTGCAAGC CACCAAGCTTACTGCCAGCAGTCGGGTGCTTGATGCCACTGCAGGCTTTGGTCATGACAGTTTGATTTTGGCCAGTAGTG GCGCCCAGCTTACCTTACTTGAGCGTAATCCGTTGATGGTATTATTGCTCAAGTATGAGCAGCAGATGATGGCCAAGCAG CCCAATTGGCAAAAACTGATGGCGCGCTTGCACATAGTTTGTGCAGAGTCTACTGAATATATGCAGCCTGCACCGACTGC CTGTGACTTGCAAGCCCAGACTATCAGCCACGCCTTTGACGTCATCTATCTAGACCCTATGTTTCCAGAGAACAGCTATG CGCATAGCTCTAAAGGTGCTAAGGTGGGTAAGCATATGCAGGCGCTACACCAGATTGCTGAGCCACCTAGCCTTAAAGAA GAGCAGGCCTTATTAAGCCTGGCCTTATCTTTTGTGGCCCCTGGGGGACGAGTGGTGGTCAAAAGACCAATACAGGCACC TGTTTTTGCCTCACAAGCTGCCAATGAAAGTTGGCAAAACGACGTGGTACGCTTCGATGCCTACTTTACTTATTTATAG
Upstream 100 bases:
>100_bases TTATACCATTCAGGGTTAATCGCCTTAATTGAGAAGGCATTAATTTTCAAAATATCAGCTTTCAAAATATCAGTTTGCAA AACAGGGACTTACGCCAGCC
Downstream 100 bases:
>100_bases CTTATTAAGTTAACAATAGTGTTTAGATATGCCCGATTGGGGCTTACTAAATCTGGGTATAAATGCTAAGCTAGATGAAA CCAAACGCTGTCTAAAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MISPISCVTLIYPQSIAEQALILIQALQQLIVEAKLPLSIEAVASEQKLTQKIRKQLSQQYQQPLLVIDDKQQLTLLTNG VSVSPEWNGLQRRVVSAGRKSELLLQATKLTASSRVLDATAGFGHDSLILASSGAQLTLLERNPLMVLLLKYEQQMMAKQ PNWQKLMARLHIVCAESTEYMQPAPTACDLQAQTISHAFDVIYLDPMFPENSYAHSSKGAKVGKHMQALHQIAEPPSLKE EQALLSLALSFVAPGGRVVVKRPIQAPVFASQAANESWQNDVVRFDAYFTYL
Sequences:
>Translated_292_residues MISPISCVTLIYPQSIAEQALILIQALQQLIVEAKLPLSIEAVASEQKLTQKIRKQLSQQYQQPLLVIDDKQQLTLLTNG VSVSPEWNGLQRRVVSAGRKSELLLQATKLTASSRVLDATAGFGHDSLILASSGAQLTLLERNPLMVLLLKYEQQMMAKQ PNWQKLMARLHIVCAESTEYMQPAPTACDLQAQTISHAFDVIYLDPMFPENSYAHSSKGAKVGKHMQALHQIAEPPSLKE EQALLSLALSFVAPGGRVVVKRPIQAPVFASQAANESWQNDVVRFDAYFTYL >Mature_292_residues MISPISCVTLIYPQSIAEQALILIQALQQLIVEAKLPLSIEAVASEQKLTQKIRKQLSQQYQQPLLVIDDKQQLTLLTNG VSVSPEWNGLQRRVVSAGRKSELLLQATKLTASSRVLDATAGFGHDSLILASSGAQLTLLERNPLMVLLLKYEQQMMAKQ PNWQKLMARLHIVCAESTEYMQPAPTACDLQAQTISHAFDVIYLDPMFPENSYAHSSKGAKVGKHMQALHQIAEPPSLKE EQALLSLALSFVAPGGRVVVKRPIQAPVFASQAANESWQNDVVRFDAYFTYL
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0341 family [H]
Homologues:
Organism=Escherichia coli, GI1789912, Length=208, Percent_Identity=33.6538461538462, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007536 [H]
Pfam domain/function: PF04445 DUF548 [H]
EC number: NA
Molecular weight: Translated: 32303; Mature: 32303
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISPISCVTLIYPQSIAEQALILIQALQQLIVEAKLPLSIEAVASEQKLTQKIRKQLSQQ CCCCHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH YQQPLLVIDDKQQLTLLTNGVSVSPEWNGLQRRVVSAGRKSELLLQATKLTASSRVLDAT HCCCEEEEECCCEEEEEECCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECC AGFGHDSLILASSGAQLTLLERNPLMVLLLKYEQQMMAKQPNWQKLMARLHIVCAESTEY CCCCCCCEEEEECCCEEEEEECCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC MQPAPTACDLQAQTISHAFDVIYLDPMFPENSYAHSSKGAKVGKHMQALHQIAEPPSLKE CCCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH EQALLSLALSFVAPGGRVVVKRPIQAPVFASQAANESWQNDVVRFDAYFTYL HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCHHHCCEEEEEEEECC >Mature Secondary Structure MISPISCVTLIYPQSIAEQALILIQALQQLIVEAKLPLSIEAVASEQKLTQKIRKQLSQQ CCCCHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH YQQPLLVIDDKQQLTLLTNGVSVSPEWNGLQRRVVSAGRKSELLLQATKLTASSRVLDAT HCCCEEEEECCCEEEEEECCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECC AGFGHDSLILASSGAQLTLLERNPLMVLLLKYEQQMMAKQPNWQKLMARLHIVCAESTEY CCCCCCCEEEEECCCEEEEEECCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC MQPAPTACDLQAQTISHAFDVIYLDPMFPENSYAHSSKGAKVGKHMQALHQIAEPPSLKE CCCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH EQALLSLALSFVAPGGRVVVKRPIQAPVFASQAANESWQNDVVRFDAYFTYL HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCHHHCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA