| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652331
Identifier: 148652331
GI number: 148652331
Start: 620808
End: 621698
Strand: Direct
Name: 148652331
Synonym: PsycPRwf_0519
Alternate gene names: NA
Gene position: 620808-621698 (Clockwise)
Preceding gene: 148652326
Following gene: 148652332
Centisome position: 20.84
GC content: 46.69
Gene sequence:
>891_bases ATGGAGAGTTTAACAAACACAGATTTAGCCAGTTCACAGACATCGAAATATCTCATTATAGGGCAGGGTGATATTGGTTT GGCAGTGACTAATGTGCTGGCTCAGCAGCAGCTTAAGGTTACGGGGTTGGCCAGAGGAGAGCGTCAGTCTTATGATTTGA ATGAACAGGCGGACTACCTGCAAGCTGATGCGCTAACGCTAACGGCAGAGCAGCTTTATCAGTTTACCCATATTGCAATC ATAGTGACCCCAGATGGCTATGAGACAAAAAACTATAAACATACTTATTTAGGTGTCGCCCAGCATGTTGCAAATTTAGC TGATCAACTGCCAAAGCTTCAAAGGGTAGTGTTTATCTCATCCACCGGGGTGTATGGACAAGATAAGGGTGAGTGGATAG ATGACACCGTTGTCCCAGTAGCCCCCAAAAGAGAAGCTTCAAAATACATCTTGCAAGCTGAGCAGGCACTGCAGCAAGTA TTTGCTGAGCGCGCGGTAATCATTCGTCCTAGTGGCATTTATGGTGAACAGCGCCTCATGCGTCTGCGTCAGGCAAAAGA GGCCGATAAAGCGCCGATGCCAGTGTCCGCTTGGACCAATCGTATTATGGATACAGACTTGGTGACCATTATTGTTAAAG TGCTCACTTTATCTGCATCTGAGCCTATAGCGCCTATGTACTTAGCAACAGACTATGCACCGGTGACCTCTTATGAGTTG ATGGTTTGGCTGTGCAATAAGCTTGGTACGACGCCGCCTGCAGTCTTAAGTGAGACAGATAAAGCGCAGGTAAGTGGCAA GCGCTTGCACAGTAACATTCCGCGCGATTGGCTGCAATATCCAGATTGGAAAAGCGGGTATATGCATATTCTACAAGCTA TTGAGGCATAA
Upstream 100 bases:
>100_bases GAATGTTAAAAGACTTAGCAGAATTAAAAGCTTAATCAAACAGTTATGATAATTGTTATAGACAATAAAAAACAGTTAAA AATAAAATGAGGAAGCGAGA
Downstream 100 bases:
>100_bases AACGTTATAATAGTTATAATATATTACACGCTTTAAAAGAGCGTTTTTACGTTAAGCTTATCAGGAGGGCGTATGTCATC AATGGGAAACTCACAAGACG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; ActC Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; Actc Protein; Epimerase/Dehydratase-Related Protein; NAD Dependent Epimerase/Dehydratase Family; Phosphate ABC Transporter Permease; NAD Dependent Epimerase/Dehydratase Family Protein; Ketopantoate Reductase ApbA/PanE Domain Protein; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MESLTNTDLASSQTSKYLIIGQGDIGLAVTNVLAQQQLKVTGLARGERQSYDLNEQADYLQADALTLTAEQLYQFTHIAI IVTPDGYETKNYKHTYLGVAQHVANLADQLPKLQRVVFISSTGVYGQDKGEWIDDTVVPVAPKREASKYILQAEQALQQV FAERAVIIRPSGIYGEQRLMRLRQAKEADKAPMPVSAWTNRIMDTDLVTIIVKVLTLSASEPIAPMYLATDYAPVTSYEL MVWLCNKLGTTPPAVLSETDKAQVSGKRLHSNIPRDWLQYPDWKSGYMHILQAIEA
Sequences:
>Translated_296_residues MESLTNTDLASSQTSKYLIIGQGDIGLAVTNVLAQQQLKVTGLARGERQSYDLNEQADYLQADALTLTAEQLYQFTHIAI IVTPDGYETKNYKHTYLGVAQHVANLADQLPKLQRVVFISSTGVYGQDKGEWIDDTVVPVAPKREASKYILQAEQALQQV FAERAVIIRPSGIYGEQRLMRLRQAKEADKAPMPVSAWTNRIMDTDLVTIIVKVLTLSASEPIAPMYLATDYAPVTSYEL MVWLCNKLGTTPPAVLSETDKAQVSGKRLHSNIPRDWLQYPDWKSGYMHILQAIEA >Mature_296_residues MESLTNTDLASSQTSKYLIIGQGDIGLAVTNVLAQQQLKVTGLARGERQSYDLNEQADYLQADALTLTAEQLYQFTHIAI IVTPDGYETKNYKHTYLGVAQHVANLADQLPKLQRVVFISSTGVYGQDKGEWIDDTVVPVAPKREASKYILQAEQALQQV FAERAVIIRPSGIYGEQRLMRLRQAKEADKAPMPVSAWTNRIMDTDLVTIIVKVLTLSASEPIAPMYLATDYAPVTSYEL MVWLCNKLGTTPPAVLSETDKAQVSGKRLHSNIPRDWLQYPDWKSGYMHILQAIEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32987; Mature: 32987
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLTNTDLASSQTSKYLIIGQGDIGLAVTNVLAQQQLKVTGLARGERQSYDLNEQADYL CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH QADALTLTAEQLYQFTHIAIIVTPDGYETKNYKHTYLGVAQHVANLADQLPKLQRVVFIS HHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE STGVYGQDKGEWIDDTVVPVAPKREASKYILQAEQALQQVFAERAVIIRPSGIYGEQRLM CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHH RLRQAKEADKAPMPVSAWTNRIMDTDLVTIIVKVLTLSASEPIAPMYLATDYAPVTSYEL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHH MVWLCNKLGTTPPAVLSETDKAQVSGKRLHSNIPRDWLQYPDWKSGYMHILQAIEA HHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MESLTNTDLASSQTSKYLIIGQGDIGLAVTNVLAQQQLKVTGLARGERQSYDLNEQADYL CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH QADALTLTAEQLYQFTHIAIIVTPDGYETKNYKHTYLGVAQHVANLADQLPKLQRVVFIS HHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE STGVYGQDKGEWIDDTVVPVAPKREASKYILQAEQALQQVFAERAVIIRPSGIYGEQRLM CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHH RLRQAKEADKAPMPVSAWTNRIMDTDLVTIIVKVLTLSASEPIAPMYLATDYAPVTSYEL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHH MVWLCNKLGTTPPAVLSETDKAQVSGKRLHSNIPRDWLQYPDWKSGYMHILQAIEA HHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA