| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652318
Identifier: 148652318
GI number: 148652318
Start: 602708
End: 604012
Strand: Direct
Name: 148652318
Synonym: PsycPRwf_0506
Alternate gene names: NA
Gene position: 602708-604012 (Clockwise)
Preceding gene: 148652316
Following gene: 148652319
Centisome position: 20.23
GC content: 44.67
Gene sequence:
>1305_bases ATGGCTAAGCAATCAAAAAGTTCAAAAAAAAGCAAAGCAGTTGTAACCGGTCTAGACGTATTAGGCCATGTGGCACGCAA TAATTTAGAGCGTTTTGGCTCTATGCTTGACAGTTTAAGTGCCAAATCAGGCAAAGCCAGTCAATTTAAAGCGGTCGATT TATCTGACTACAAAACCAGCACGGCCAGCAACTTGTTAAGCCAACAAACCATTAAGACCTCAGAGCAGCTATTGGGTAAG CGCTTTGCGACTTATGGCAAATATGCCAAAAAAGTTGTGCCAAACAGTATTTATCAAAAGGCGTCTGACAGCGTATTTTC ACAAGTGGCAAAATTGGCTGCCACATGGAGTGAAATCGATTTACCACGCGAGCAGCGCTTTGAGGGCATTCAGACGTTAA GCGATCAAGAGCGCAATGCGTTGGCACGTGATATAGCCAACCAAAACCGTGCTTTAGCTACTATAGGCGGTGTAACGGGT CTGGCTGGTCTACCGGGTATGTTGGCTGATACGCTGTGGTTGCTTTTGGTATCACTACGCACGGTTTATCAGTTGGCCAC TGTGTATGATAAACCCTTAACCGGTAAGCAAGGTATTAAAATGGCGTATGCGGTGATTGGCAGCGCTGACTTAAGCAAAA TGCAAGAAAAACAGACGATTTTAGCAGCGCTAGGTGTGGCCAAAGGTTTAATTAGCAATGCAGATAATACGGGTCTACGT AGTGAGCTTTCAAAAGGCTTAGGCATTGCTGGCAGTAATATTGAGTTTTATGCCAAACAAGTGGATAAGTTAGCAGAGCA GTTTAACTTCGACTTAGACAGCATTAATATCAGCTGGATGGGCAAGTTCTTACCGCTTGTGGCTGTGGGAACTACGGTAC ATTACAACAGCCATTTGATTGATCAAGTTATCGGTGTGGCCAAGGCAACATTTGGTCCAGAGCCCATTGTGGCGAAGCAA GCGTTAACGGATGCAACCCATGAAGAGGATCAATCAGACAACGCGTCAGAAGAAGCTGCCGATAAAAAGCAGCCTGCTAA AAACGATAGTGAGGCTAAAACACAAAGCGCTGATGAAGCAGCTGACAACAATGCTGACAACAAGGCTGACAAAAATGCTG ACAATAAGCAAACTAAGGCTGATAAAAAAACTGAAGTAAGCGATGACGTGGCCGATCAATTCGGTGAAGAGCCTACAGAT CCCACCAAAGGTGCAGAAACCCAAGAAAGCTATGACTTTCACACACAAGAGGGGCAACCTGCCAATGACGCTAAAAATGA CGCTAAAAAAGATCAAGCCAAATAG
Upstream 100 bases:
>100_bases CAAGTTTAACAATACTCAGCCATTATCCATAATGGCACTTTAGGGCTTATTTTTATTCGCTATTTACCTTTAATTTTTAC TCATTCAGGAAGAATATTTT
Downstream 100 bases:
>100_bases CCTAATAGCTTGATAATTTAATAAGCTTATTTTGGCTTAATAACCGTTTAGACAGGTCAGGGCGTGACGTAAGGTGAGTA TTGTTTAATACCACCTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MAKQSKSSKKSKAVVTGLDVLGHVARNNLERFGSMLDSLSAKSGKASQFKAVDLSDYKTSTASNLLSQQTIKTSEQLLGK RFATYGKYAKKVVPNSIYQKASDSVFSQVAKLAATWSEIDLPREQRFEGIQTLSDQERNALARDIANQNRALATIGGVTG LAGLPGMLADTLWLLLVSLRTVYQLATVYDKPLTGKQGIKMAYAVIGSADLSKMQEKQTILAALGVAKGLISNADNTGLR SELSKGLGIAGSNIEFYAKQVDKLAEQFNFDLDSINISWMGKFLPLVAVGTTVHYNSHLIDQVIGVAKATFGPEPIVAKQ ALTDATHEEDQSDNASEEAADKKQPAKNDSEAKTQSADEAADNNADNKADKNADNKQTKADKKTEVSDDVADQFGEEPTD PTKGAETQESYDFHTQEGQPANDAKNDAKKDQAK
Sequences:
>Translated_434_residues MAKQSKSSKKSKAVVTGLDVLGHVARNNLERFGSMLDSLSAKSGKASQFKAVDLSDYKTSTASNLLSQQTIKTSEQLLGK RFATYGKYAKKVVPNSIYQKASDSVFSQVAKLAATWSEIDLPREQRFEGIQTLSDQERNALARDIANQNRALATIGGVTG LAGLPGMLADTLWLLLVSLRTVYQLATVYDKPLTGKQGIKMAYAVIGSADLSKMQEKQTILAALGVAKGLISNADNTGLR SELSKGLGIAGSNIEFYAKQVDKLAEQFNFDLDSINISWMGKFLPLVAVGTTVHYNSHLIDQVIGVAKATFGPEPIVAKQ ALTDATHEEDQSDNASEEAADKKQPAKNDSEAKTQSADEAADNNADNKADKNADNKQTKADKKTEVSDDVADQFGEEPTD PTKGAETQESYDFHTQEGQPANDAKNDAKKDQAK >Mature_433_residues AKQSKSSKKSKAVVTGLDVLGHVARNNLERFGSMLDSLSAKSGKASQFKAVDLSDYKTSTASNLLSQQTIKTSEQLLGKR FATYGKYAKKVVPNSIYQKASDSVFSQVAKLAATWSEIDLPREQRFEGIQTLSDQERNALARDIANQNRALATIGGVTGL AGLPGMLADTLWLLLVSLRTVYQLATVYDKPLTGKQGIKMAYAVIGSADLSKMQEKQTILAALGVAKGLISNADNTGLRS ELSKGLGIAGSNIEFYAKQVDKLAEQFNFDLDSINISWMGKFLPLVAVGTTVHYNSHLIDQVIGVAKATFGPEPIVAKQA LTDATHEEDQSDNASEEAADKKQPAKNDSEAKTQSADEAADNNADNKADKNADNKQTKADKKTEVSDDVADQFGEEPTDP TKGAETQESYDFHTQEGQPANDAKNDAKKDQAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46761; Mature: 46629
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQSKSSKKSKAVVTGLDVLGHVARNNLERFGSMLDSLSAKSGKASQFKAVDLSDYKTS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHH TASNLLSQQTIKTSEQLLGKRFATYGKYAKKVVPNSIYQKASDSVFSQVAKLAATWSEID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC LPREQRFEGIQTLSDQERNALARDIANQNRALATIGGVTGLAGLPGMLADTLWLLLVSLR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHCCCHHHHHHHHHHHHHHH TVYQLATVYDKPLTGKQGIKMAYAVIGSADLSKMQEKQTILAALGVAKGLISNADNTGLR HHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH SELSKGLGIAGSNIEFYAKQVDKLAEQFNFDLDSINISWMGKFLPLVAVGTTVHYNSHLI HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCHHHH DQVIGVAKATFGPEPIVAKQALTDATHEEDQSDNASEEAADKKQPAKNDSEAKTQSADEA HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH ADNNADNKADKNADNKQTKADKKTEVSDDVADQFGEEPTDPTKGAETQESYDFHTQEGQP HCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC ANDAKNDAKKDQAK CCCHHHHHHHCCCC >Mature Secondary Structure AKQSKSSKKSKAVVTGLDVLGHVARNNLERFGSMLDSLSAKSGKASQFKAVDLSDYKTS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHH TASNLLSQQTIKTSEQLLGKRFATYGKYAKKVVPNSIYQKASDSVFSQVAKLAATWSEID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC LPREQRFEGIQTLSDQERNALARDIANQNRALATIGGVTGLAGLPGMLADTLWLLLVSLR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHCCCHHHHHHHHHHHHHHH TVYQLATVYDKPLTGKQGIKMAYAVIGSADLSKMQEKQTILAALGVAKGLISNADNTGLR HHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH SELSKGLGIAGSNIEFYAKQVDKLAEQFNFDLDSINISWMGKFLPLVAVGTTVHYNSHLI HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCHHHH DQVIGVAKATFGPEPIVAKQALTDATHEEDQSDNASEEAADKKQPAKNDSEAKTQSADEA HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH ADNNADNKADKNADNKQTKADKKTEVSDDVADQFGEEPTDPTKGAETQESYDFHTQEGQP HCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC ANDAKNDAKKDQAK CCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA