| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is frp [H]
Identifier: 148652305
GI number: 148652305
Start: 588651
End: 589460
Strand: Direct
Name: frp [H]
Synonym: PsycPRwf_0493
Alternate gene names: 148652305
Gene position: 588651-589460 (Clockwise)
Preceding gene: 148652304
Following gene: 148652306
Centisome position: 19.76
GC content: 45.68
Gene sequence:
>810_bases ATGACCGATGTTTCTGAAAATATAAAAAAAATGAACTCAACCTTAGACGCTATGCTATCTCATCGCTCAGTTCGCAGCTT TACCGATGAGCCGATTAGCGAGCAGATGCTTGAAGCCATCTTACAGGCAGGACGTGCCGTCTCAACGTCCAACTACATGC AATCTGTTAGTGTCATTCGTATTACAGATCCTGAGCAGCGCATTAAATTTCACCAAATCTCTAATGGCATGACACAAGAG CAATACAATCAAGCCAAAAGCGAGGGCAAAAAACTGGCGCATCCTTATATCTTAGAGTGCCCGGAGTATCTGGTTTTTTG TATGGATAACTACCGTCATCACTTAGTTGAGCCTGAGGCACAGCTGGACTGGATGGAGGTGGTCATTATCTCAGCTGTCG ATGTTGGCCTGTATGCACAAAATGTAATGGCTGCCGCTGAGTCTTTAGGGCTAGGTGGTGTGTATATTGGCAGTATGCGT AATGACATCGAGCGAGCGGGTGAGGTTATTAATGCCCCCAAACACGTTGTGCCCTTATTTGGTATGTGTTTGGGTCATCC CAGCGATGCACCGGTTAATGCTACGCAAAAGCCACGATTCCCATTGTCTATGCTGGTCTCTGAAAATCAGTATACACCGG CCACTCAGCAGCAAATCGATGCCTTTAATAAAGAGGTAAAAGACTACTATGACAAAAGAGGTAGTCAGGAGCATAAAGCT TGGGAAGCTCAAGTGACCAAAACCTTTGCGACGGCAGTGCGCCCTCAGGTTATGCCATATTTAAACAAACAAGGTTACGC CAAACGCTAA
Upstream 100 bases:
>100_bases TACAGTTTAAGAGGGGGAGGGTTTTGCTTGACGCTCTCTTATCCTTGATATCTGACAGTTTATATCTGCTGTTATAAATT TAATCAAGTAAGGATTGGCT
Downstream 100 bases:
>100_bases TCTTATAAGTAACAGAACGTACTCAAGTTCTGTTAACCTTATGTTATAGGGATAGAACATGTTCGATTTCGAACAGCTAT TACTGCCCTTTATATTTGCA
Product: nitroreductase
Products: NA
Alternate protein names: Flavin reductase P; NADPH-FMN oxidoreductase [H]
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MTDVSENIKKMNSTLDAMLSHRSVRSFTDEPISEQMLEAILQAGRAVSTSNYMQSVSVIRITDPEQRIKFHQISNGMTQE QYNQAKSEGKKLAHPYILECPEYLVFCMDNYRHHLVEPEAQLDWMEVVIISAVDVGLYAQNVMAAAESLGLGGVYIGSMR NDIERAGEVINAPKHVVPLFGMCLGHPSDAPVNATQKPRFPLSMLVSENQYTPATQQQIDAFNKEVKDYYDKRGSQEHKA WEAQVTKTFATAVRPQVMPYLNKQGYAKR
Sequences:
>Translated_269_residues MTDVSENIKKMNSTLDAMLSHRSVRSFTDEPISEQMLEAILQAGRAVSTSNYMQSVSVIRITDPEQRIKFHQISNGMTQE QYNQAKSEGKKLAHPYILECPEYLVFCMDNYRHHLVEPEAQLDWMEVVIISAVDVGLYAQNVMAAAESLGLGGVYIGSMR NDIERAGEVINAPKHVVPLFGMCLGHPSDAPVNATQKPRFPLSMLVSENQYTPATQQQIDAFNKEVKDYYDKRGSQEHKA WEAQVTKTFATAVRPQVMPYLNKQGYAKR >Mature_268_residues TDVSENIKKMNSTLDAMLSHRSVRSFTDEPISEQMLEAILQAGRAVSTSNYMQSVSVIRITDPEQRIKFHQISNGMTQEQ YNQAKSEGKKLAHPYILECPEYLVFCMDNYRHHLVEPEAQLDWMEVVIISAVDVGLYAQNVMAAAESLGLGGVYIGSMRN DIERAGEVINAPKHVVPLFGMCLGHPSDAPVNATQKPRFPLSMLVSENQYTPATQQQIDAFNKEVKDYYDKRGSQEHKAW EAQVTKTFATAVRPQVMPYLNKQGYAKR
Specific function: Involved in bioluminescence. It is a good supplier of reduced flavin mononucleotide (FMNH2) to the bioluminescence reaction [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin oxidoreductase frp family [H]
Homologues:
Organism=Escherichia coli, GI1787075, Length=260, Percent_Identity=40, Blast_Score=199, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016446 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 30333; Mature: 30202
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVSENIKKMNSTLDAMLSHRSVRSFTDEPISEQMLEAILQAGRAVSTSNYMQSVSVIR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHEEEEE ITDPEQRIKFHQISNGMTQEQYNQAKSEGKKLAHPYILECPEYLVFCMDNYRHHLVEPEA ECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHCCCCH QLDWMEVVIISAVDVGLYAQNVMAAAESLGLGGVYIGSMRNDIERAGEVINAPKHVVPLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHH GMCLGHPSDAPVNATQKPRFPLSMLVSENQYTPATQQQIDAFNKEVKDYYDKRGSQEHKA HHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH WEAQVTKTFATAVRPQVMPYLNKQGYAKR HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TDVSENIKKMNSTLDAMLSHRSVRSFTDEPISEQMLEAILQAGRAVSTSNYMQSVSVIR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHEEEEE ITDPEQRIKFHQISNGMTQEQYNQAKSEGKKLAHPYILECPEYLVFCMDNYRHHLVEPEA ECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHCCCCH QLDWMEVVIISAVDVGLYAQNVMAAAESLGLGGVYIGSMRNDIERAGEVINAPKHVVPLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHH GMCLGHPSDAPVNATQKPRFPLSMLVSENQYTPATQQQIDAFNKEVKDYYDKRGSQEHKA HHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH WEAQVTKTFATAVRPQVMPYLNKQGYAKR HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8206832; 8885832 [H]