Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148652278

Identifier: 148652278

GI number: 148652278

Start: 550210

End: 551022

Strand: Direct

Name: 148652278

Synonym: PsycPRwf_0466

Alternate gene names: NA

Gene position: 550210-551022 (Clockwise)

Preceding gene: 148652276

Following gene: 148652279

Centisome position: 18.47

GC content: 51.17

Gene sequence:

>813_bases
ATGATGATACTGTGGTTTTTATTGGCAGGAACCTTTGCAGGCGTGTGTGCCGGTCTATTCGGTGTGGGCGGTGGTATGAT
TATTGTGCCAGCACTGGTGTGGATGTTCACCGCTTATGGCTATTCACCCGATATCATTGCGCATTTGGCAGTGGGCACCT
CACTGGCAACCATTATGGTTACCTCCATCAGCTCTTTGACCGCACACCACAAGCGTGGCGGTGTGCGCTGGGAAGTATGG
AAAAATATGGCCATTGGTTTGGTCGTCGGCAGCTTACTTGGTGCAGCAGTGGCTGATCAAATGAATGGCTTAATGCTACA
AGCACTGATTGGTGTGGCAGCGCTGCTGGTAGCCTTTAAGATGCTGTTTTTGTCCAATAAAGAAAATTTAGGTCGTCCTC
TACCTTCAGCACCGGTTCAAATTGGCGCCGGCTCTGGTATTGGTATGGCATCCGCAATATTCGGTATCGGCGGTGGCAGT
TTAACTGTGCCTTTTTTGACGTGGGCAGGCTTACCGATGCGTCAAGCGGTAGGCACATCAGCCGCTTGCGGATTACCGAT
TGCCCTGGCGGGTGCGGCAGGCTTTGCTTGGTTTGGTCAGGACGTGGTAGGCTTGCCTTCTGGGGCCATTGGCTTTGTAC
ATGTTACCGGATTTATTTGTATCTCGATCGCCAGCTTTATCACCGCTAAACTGGGCGCAAAATGGGCGCACCAATTACCG
GCTGCTACCTTAAAAAAGGGCTTTGGTGCACTCTTGGTAATCGCAGGCAGTCAGTTGTTGTGGTCAGGCCTAAAAGGCAT
GGGTGTTATTTAG

Upstream 100 bases:

>100_bases
TGTTATACTGACCCTGCAGGTAAGTTTAAGACTCATTAACTGTGATTTGCTAAGTATTGAATAGGTATCGGCAAAGCGCA
CAAGGCAGGAAGAAACAAGT

Downstream 100 bases:

>100_bases
ATAAGCACAGCGCAAAACCTGAAAAATCACCGCGTTTGCGGTAAAATAGCCGCGCTCATTTGGCTGATAGACAGCTACGT
TTTCTCCTTCTTATCTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MMILWFLLAGTFAGVCAGLFGVGGGMIIVPALVWMFTAYGYSPDIIAHLAVGTSLATIMVTSISSLTAHHKRGGVRWEVW
KNMAIGLVVGSLLGAAVADQMNGLMLQALIGVAALLVAFKMLFLSNKENLGRPLPSAPVQIGAGSGIGMASAIFGIGGGS
LTVPFLTWAGLPMRQAVGTSAACGLPIALAGAAGFAWFGQDVVGLPSGAIGFVHVTGFICISIASFITAKLGAKWAHQLP
AATLKKGFGALLVIAGSQLLWSGLKGMGVI

Sequences:

>Translated_270_residues
MMILWFLLAGTFAGVCAGLFGVGGGMIIVPALVWMFTAYGYSPDIIAHLAVGTSLATIMVTSISSLTAHHKRGGVRWEVW
KNMAIGLVVGSLLGAAVADQMNGLMLQALIGVAALLVAFKMLFLSNKENLGRPLPSAPVQIGAGSGIGMASAIFGIGGGS
LTVPFLTWAGLPMRQAVGTSAACGLPIALAGAAGFAWFGQDVVGLPSGAIGFVHVTGFICISIASFITAKLGAKWAHQLP
AATLKKGFGALLVIAGSQLLWSGLKGMGVI
>Mature_270_residues
MMILWFLLAGTFAGVCAGLFGVGGGMIIVPALVWMFTAYGYSPDIIAHLAVGTSLATIMVTSISSLTAHHKRGGVRWEVW
KNMAIGLVVGSLLGAAVADQMNGLMLQALIGVAALLVAFKMLFLSNKENLGRPLPSAPVQIGAGSGIGMASAIFGIGGGS
LTVPFLTWAGLPMRQAVGTSAACGLPIALAGAAGFAWFGQDVVGLPSGAIGFVHVTGFICISIASFITAKLGAKWAHQLP
AATLKKGFGALLVIAGSQLLWSGLKGMGVI

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27437; Mature: 27437

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCEEEEEECHHHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHCCCEEEEEECHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]