| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652278
Identifier: 148652278
GI number: 148652278
Start: 550210
End: 551022
Strand: Direct
Name: 148652278
Synonym: PsycPRwf_0466
Alternate gene names: NA
Gene position: 550210-551022 (Clockwise)
Preceding gene: 148652276
Following gene: 148652279
Centisome position: 18.47
GC content: 51.17
Gene sequence:
>813_bases ATGATGATACTGTGGTTTTTATTGGCAGGAACCTTTGCAGGCGTGTGTGCCGGTCTATTCGGTGTGGGCGGTGGTATGAT TATTGTGCCAGCACTGGTGTGGATGTTCACCGCTTATGGCTATTCACCCGATATCATTGCGCATTTGGCAGTGGGCACCT CACTGGCAACCATTATGGTTACCTCCATCAGCTCTTTGACCGCACACCACAAGCGTGGCGGTGTGCGCTGGGAAGTATGG AAAAATATGGCCATTGGTTTGGTCGTCGGCAGCTTACTTGGTGCAGCAGTGGCTGATCAAATGAATGGCTTAATGCTACA AGCACTGATTGGTGTGGCAGCGCTGCTGGTAGCCTTTAAGATGCTGTTTTTGTCCAATAAAGAAAATTTAGGTCGTCCTC TACCTTCAGCACCGGTTCAAATTGGCGCCGGCTCTGGTATTGGTATGGCATCCGCAATATTCGGTATCGGCGGTGGCAGT TTAACTGTGCCTTTTTTGACGTGGGCAGGCTTACCGATGCGTCAAGCGGTAGGCACATCAGCCGCTTGCGGATTACCGAT TGCCCTGGCGGGTGCGGCAGGCTTTGCTTGGTTTGGTCAGGACGTGGTAGGCTTGCCTTCTGGGGCCATTGGCTTTGTAC ATGTTACCGGATTTATTTGTATCTCGATCGCCAGCTTTATCACCGCTAAACTGGGCGCAAAATGGGCGCACCAATTACCG GCTGCTACCTTAAAAAAGGGCTTTGGTGCACTCTTGGTAATCGCAGGCAGTCAGTTGTTGTGGTCAGGCCTAAAAGGCAT GGGTGTTATTTAG
Upstream 100 bases:
>100_bases TGTTATACTGACCCTGCAGGTAAGTTTAAGACTCATTAACTGTGATTTGCTAAGTATTGAATAGGTATCGGCAAAGCGCA CAAGGCAGGAAGAAACAAGT
Downstream 100 bases:
>100_bases ATAAGCACAGCGCAAAACCTGAAAAATCACCGCGTTTGCGGTAAAATAGCCGCGCTCATTTGGCTGATAGACAGCTACGT TTTCTCCTTCTTATCTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MMILWFLLAGTFAGVCAGLFGVGGGMIIVPALVWMFTAYGYSPDIIAHLAVGTSLATIMVTSISSLTAHHKRGGVRWEVW KNMAIGLVVGSLLGAAVADQMNGLMLQALIGVAALLVAFKMLFLSNKENLGRPLPSAPVQIGAGSGIGMASAIFGIGGGS LTVPFLTWAGLPMRQAVGTSAACGLPIALAGAAGFAWFGQDVVGLPSGAIGFVHVTGFICISIASFITAKLGAKWAHQLP AATLKKGFGALLVIAGSQLLWSGLKGMGVI
Sequences:
>Translated_270_residues MMILWFLLAGTFAGVCAGLFGVGGGMIIVPALVWMFTAYGYSPDIIAHLAVGTSLATIMVTSISSLTAHHKRGGVRWEVW KNMAIGLVVGSLLGAAVADQMNGLMLQALIGVAALLVAFKMLFLSNKENLGRPLPSAPVQIGAGSGIGMASAIFGIGGGS LTVPFLTWAGLPMRQAVGTSAACGLPIALAGAAGFAWFGQDVVGLPSGAIGFVHVTGFICISIASFITAKLGAKWAHQLP AATLKKGFGALLVIAGSQLLWSGLKGMGVI >Mature_270_residues MMILWFLLAGTFAGVCAGLFGVGGGMIIVPALVWMFTAYGYSPDIIAHLAVGTSLATIMVTSISSLTAHHKRGGVRWEVW KNMAIGLVVGSLLGAAVADQMNGLMLQALIGVAALLVAFKMLFLSNKENLGRPLPSAPVQIGAGSGIGMASAIFGIGGGS LTVPFLTWAGLPMRQAVGTSAACGLPIALAGAAGFAWFGQDVVGLPSGAIGFVHVTGFICISIASFITAKLGAKWAHQLP AATLKKGFGALLVIAGSQLLWSGLKGMGVI
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 27437; Mature: 27437
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMILWFLLAGTFAGVCAGLFGVGGGMIIVPALVWMFTAYGYSPDIIAHLAVGTSLATIMV CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TSISSLTAHHKRGGVRWEVWKNMAIGLVVGSLLGAAVADQMNGLMLQALIGVAALLVAFK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLFLSNKENLGRPLPSAPVQIGAGSGIGMASAIFGIGGGSLTVPFLTWAGLPMRQAVGTS HHHHCCCHHCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCEEHHHHHHCCCCHHHHHCCC AACGLPIALAGAAGFAWFGQDVVGLPSGAIGFVHVTGFICISIASFITAKLGAKWAHQLP CCCCCCHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AATLKKGFGALLVIAGSQLLWSGLKGMGVI HHHHHHCCCEEEEEECHHHHHHCCCCCCCC >Mature Secondary Structure MMILWFLLAGTFAGVCAGLFGVGGGMIIVPALVWMFTAYGYSPDIIAHLAVGTSLATIMV CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TSISSLTAHHKRGGVRWEVWKNMAIGLVVGSLLGAAVADQMNGLMLQALIGVAALLVAFK HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLFLSNKENLGRPLPSAPVQIGAGSGIGMASAIFGIGGGSLTVPFLTWAGLPMRQAVGTS HHHHCCCHHCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCEEHHHHHHCCCCHHHHHCCC AACGLPIALAGAAGFAWFGQDVVGLPSGAIGFVHVTGFICISIASFITAKLGAKWAHQLP CCCCCCHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AATLKKGFGALLVIAGSQLLWSGLKGMGVI HHHHHHCCCEEEEEECHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]