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The map label for this gene is nudL [H]

Identifier: 148652276

GI number: 148652276

Start: 547859

End: 548842

Strand: Direct

Name: nudL [H]

Synonym: PsycPRwf_0464

Alternate gene names: 148652276

Gene position: 547859-548842 (Clockwise)

Preceding gene: 148652273

Following gene: 148652278

Centisome position: 18.39

GC content: 51.02

Gene sequence:

>984_bases
ATGAAATCCTCTATTGAAACGCTACTTGTACCACAAAATCTGTATCAAAATGAGCACTCACCACGCTTTGAAGAGCTTGC
GGTGGTGTTGCCTGAGCAGGTCATTCACCCTAAGCTTAGGCAGCTGGTTGAAAGGGTACAACAGCACACATTGCATGCCA
CCTTTAAGCAAGACATAGCGGACACCAAGGTTCACACTCAGGCGCAGTTGGCGGCGCACTTCCAAGGCAACTCTCAAGAT
AATGCCCGTGCTACTGAGCAGGGCAAGTCTGCGCATAATCCGTCTCACTCTACAACAACTGATGCTGCAGTTGATGGCAT
ACAATCGGTACTCAAAAAGGAGGTGGCCACGGTCAAGGGTGGCGCACACACTAAAAATACCGAGTTGTCATCAGGGGACA
TCAGTCGAGCCCAAAGGATTTTAGATAAGCTGGTCACCACTGACAATGCAGATGCCGCAGTTTTGGTGGTTATTACCAAC
GAGGCGCATCCTAAAATGCTGCTGACTCGGCGTGCTGCCCACTTAAGCAGCCATGCCGGAGAGGTGTCTTTTGCGGGAGG
AAAGCACGACACAGGTGACGGTAATAATGTGGTTACAGCGCTGCGAGAGGCCTGCGAAGAGACTGCTCTACCACCGAGCA
AAGCACAGATTGTTGGTCAATTACCAATTCAGGTATCCAAAAAGGGACTGGTGGTGCGTCCTATCGTGGCTTTGGTGGAG
CCGCCCATTACCTATGTGCCTGAGCTGGGCGAGATTGCTCGTATTTTTTGGGCTGACTTTGAGACGCTAATCGAGCAGCC
CACCACAGACCACATTTTGCCTTATACCATCAATGGCCAGACCCTTAATATAAAGACACCCAGCTGGCGTGTAGATGGTG
AAGTGGTGTGGGGGCTGACCGGTCGGGTGCTGGCTGGTTTACTACAGATCGGTTTTGATCGCGAAGTGACTTGGTATTAT
GAGCCGGTTGACGGCTCTGATTAA

Upstream 100 bases:

>100_bases
AATTACTAAGGCCAATCTATCATCAAGATAGCATATTTCAGCATAATACGTTAGTCTAACCCTACACTCTTATTTGTTGG
CTTACTGTTTATCGCGCCTT

Downstream 100 bases:

>100_bases
CCCATCAAACTCTCATCTTCATCTTGAATCTGCATATTTAGCCTTTATCCTTGCCCGTTAAACGGATGGTGCCTGTGTAG
ATATTACGCGGCTCTACGTA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKSSIETLLVPQNLYQNEHSPRFEELAVVLPEQVIHPKLRQLVERVQQHTLHATFKQDIADTKVHTQAQLAAHFQGNSQD
NARATEQGKSAHNPSHSTTTDAAVDGIQSVLKKEVATVKGGAHTKNTELSSGDISRAQRILDKLVTTDNADAAVLVVITN
EAHPKMLLTRRAAHLSSHAGEVSFAGGKHDTGDGNNVVTALREACEETALPPSKAQIVGQLPIQVSKKGLVVRPIVALVE
PPITYVPELGEIARIFWADFETLIEQPTTDHILPYTINGQTLNIKTPSWRVDGEVVWGLTGRVLAGLLQIGFDREVTWYY
EPVDGSD

Sequences:

>Translated_327_residues
MKSSIETLLVPQNLYQNEHSPRFEELAVVLPEQVIHPKLRQLVERVQQHTLHATFKQDIADTKVHTQAQLAAHFQGNSQD
NARATEQGKSAHNPSHSTTTDAAVDGIQSVLKKEVATVKGGAHTKNTELSSGDISRAQRILDKLVTTDNADAAVLVVITN
EAHPKMLLTRRAAHLSSHAGEVSFAGGKHDTGDGNNVVTALREACEETALPPSKAQIVGQLPIQVSKKGLVVRPIVALVE
PPITYVPELGEIARIFWADFETLIEQPTTDHILPYTINGQTLNIKTPSWRVDGEVVWGLTGRVLAGLLQIGFDREVTWYY
EPVDGSD
>Mature_327_residues
MKSSIETLLVPQNLYQNEHSPRFEELAVVLPEQVIHPKLRQLVERVQQHTLHATFKQDIADTKVHTQAQLAAHFQGNSQD
NARATEQGKSAHNPSHSTTTDAAVDGIQSVLKKEVATVKGGAHTKNTELSSGDISRAQRILDKLVTTDNADAAVLVVITN
EAHPKMLLTRRAAHLSSHAGEVSFAGGKHDTGDGNNVVTALREACEETALPPSKAQIVGQLPIQVSKKGLVVRPIVALVE
PPITYVPELGEIARIFWADFETLIEQPTTDHILPYTINGQTLNIKTPSWRVDGEVVWGLTGRVLAGLLQIGFDREVTWYY
EPVDGSD

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788115, Length=167, Percent_Identity=35.3293413173653, Blast_Score=73, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17510677, Length=119, Percent_Identity=38.655462184874, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI18859683, Length=158, Percent_Identity=33.5443037974684, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 35746; Mature: 35746

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSIETLLVPQNLYQNEHSPRFEELAVVLPEQVIHPKLRQLVERVQQHTLHATFKQDIA
CCCCCCCEECCHHHHCCCCCCCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
DTKVHTQAQLAAHFQGNSQDNARATEQGKSAHNPSHSTTTDAAVDGIQSVLKKEVATVKG
HHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
GAHTKNTELSSGDISRAQRILDKLVTTDNADAAVLVVITNEAHPKMLLTRRAAHLSSHAG
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCC
EVSFAGGKHDTGDGNNVVTALREACEETALPPSKAQIVGQLPIQVSKKGLVVRPIVALVE
CEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCEEECCCCEEHHHHHHHHC
PPITYVPELGEIARIFWADFETLIEQPTTDHILPYTINGQTLNIKTPSWRVDGEVVWGLT
CCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCEEECCEEEECCH
GRVLAGLLQIGFDREVTWYYEPVDGSD
HHHHHHHHHHCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MKSSIETLLVPQNLYQNEHSPRFEELAVVLPEQVIHPKLRQLVERVQQHTLHATFKQDIA
CCCCCCCEECCHHHHCCCCCCCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
DTKVHTQAQLAAHFQGNSQDNARATEQGKSAHNPSHSTTTDAAVDGIQSVLKKEVATVKG
HHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
GAHTKNTELSSGDISRAQRILDKLVTTDNADAAVLVVITNEAHPKMLLTRRAAHLSSHAG
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCC
EVSFAGGKHDTGDGNNVVTALREACEETALPPSKAQIVGQLPIQVSKKGLVVRPIVALVE
CEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCEEECCCCEEHHHHHHHHC
PPITYVPELGEIARIFWADFETLIEQPTTDHILPYTINGQTLNIKTPSWRVDGEVVWGLT
CCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCEEECCEEEECCH
GRVLAGLLQIGFDREVTWYYEPVDGSD
HHHHHHHHHHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]