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The map label for this gene is secY [H]

Identifier: 148652258

GI number: 148652258

Start: 532291

End: 533622

Strand: Direct

Name: secY [H]

Synonym: PsycPRwf_0446

Alternate gene names: 148652258

Gene position: 532291-533622 (Clockwise)

Preceding gene: 148652257

Following gene: 148652259

Centisome position: 17.87

GC content: 42.79

Gene sequence:

>1332_bases
ATGGCTAAGCAATCTGCGCCTACCTCTGCAATTCCGATGAACCCGCTCGTTTTTATTCGTAAATATGATGAGCTATGGAA
TCGTCTGTTATTTTTGATAGGGGCGCTGGTTGTCTACCGTTTAGGTTCACATATCCCAGTTCCTGGTATTAATCCGGTTA
GCCTAGCTGACTTATTCTCTCGCAATGAAAACACCATCTTAAGCATGTTCAACATGTTCTCAGGTGGTGCTTTAGAGCGA
ATGTCAATTATGGCTTTGGGTATCATGCCTTACATCTCAGCTTCTATTATCGTACAGATGATGTCGGCGGTACTACCGTC
GCTTGAAGCTTTGAAAAAAGAAGGAGAGGCCGGTCGTCGTAAGCTGAACAAGTATACGCGACAAGGGACTCTCTTTTTGG
CATCTATTCAAGCCATATTTATGTGTACTGGATTAATCAGTCAAAACCTGACTTTATCCTCAGGGTTAACCTTTTATATT
CCTGCTGTGAGCTCTCTTGTAGCAGGCGCCATGTTCTTGATGTGGCTTGGTGAGCAAATTACAGAACGCGGTGTGGGCAA
TGGTATTTCAATGCTTATTTTTGCAAGCATTGTATCCAGTGTGCCTAGTATGTTAGGTCAGTCTTTCGAAATGGTCAAAA
ATGACCCTCAAAGTCTGATTGTACTGCTGATATTTGCGGTATTAGGCATTGCAGTGACTGCAGGTATTGTGTTTATTGAA
CGAGCACAGCGCCGCATCCCTGTTAACTATGCGCAAAAACAGCAACTAGGTCGTAAAATTTATGCCGATCAGCAGTCGCA
TTTGCCGCTGAAGATTAATATGGCCGGCGTTATCCCAGCGATTTTTGCCAGCGCTTTATTAATGTTCCCAGCAAGTCTGG
GGCAGTGGGTAGGTAACTCTGCCGATCCTAGTACATGGCAGCAAATTCTACAAACCATGTCATTAGTTCTCGCACCGGGT
CAGCCATTATATTTGGTTTTATTTGGTGCAATGATTATTTTCTTCTGTTATTTCTACACGGCATTGGTATTTAGTCCACG
TGAAGTAGCAGAGAATTTGAAACGTAGTGGTGCATACATTCCTGGCATTAGACCCGGTCTGCAAACTCAGCGTTATCTAG
ATCACGTATTAAACCGCTTAACCTTCATTGGAGCGATTTATATGACGGCGATTTGTTTAATGCCAATGCTACTACAGTCT
TCATTTGGCATACCATTCCACTTAGGTGGGACATCACTTTTAATTATGGTAGTCGTGGTTATGGATTTCATTTCACAGCT
ACAGGCTCACTTAATGACACATCAGTATCATGATCAAACACTGATTAGATAG

Upstream 100 bases:

>100_bases
ATACATTCAAAGGTGTTAAAGTAACTAAAGGTGCTAAAGCTGCTATTGAAGCTGCCGGCGGTACTGTTGAAGTTACTGAG
GGTACTGAGGAGTAATTTAG

Downstream 100 bases:

>100_bases
GTCTTAACTTTATCCTTAAAATCGCTAAAAAGTGTTTGTTCAATAGGAGAAAATTATGAAAGTTCAAGCATCTGTTAAGA
AAATTTGTGGTAGCTGTAAA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MAKQSAPTSAIPMNPLVFIRKYDELWNRLLFLIGALVVYRLGSHIPVPGINPVSLADLFSRNENTILSMFNMFSGGALER
MSIMALGIMPYISASIIVQMMSAVLPSLEALKKEGEAGRRKLNKYTRQGTLFLASIQAIFMCTGLISQNLTLSSGLTFYI
PAVSSLVAGAMFLMWLGEQITERGVGNGISMLIFASIVSSVPSMLGQSFEMVKNDPQSLIVLLIFAVLGIAVTAGIVFIE
RAQRRIPVNYAQKQQLGRKIYADQQSHLPLKINMAGVIPAIFASALLMFPASLGQWVGNSADPSTWQQILQTMSLVLAPG
QPLYLVLFGAMIIFFCYFYTALVFSPREVAENLKRSGAYIPGIRPGLQTQRYLDHVLNRLTFIGAIYMTAICLMPMLLQS
SFGIPFHLGGTSLLIMVVVVMDFISQLQAHLMTHQYHDQTLIR

Sequences:

>Translated_443_residues
MAKQSAPTSAIPMNPLVFIRKYDELWNRLLFLIGALVVYRLGSHIPVPGINPVSLADLFSRNENTILSMFNMFSGGALER
MSIMALGIMPYISASIIVQMMSAVLPSLEALKKEGEAGRRKLNKYTRQGTLFLASIQAIFMCTGLISQNLTLSSGLTFYI
PAVSSLVAGAMFLMWLGEQITERGVGNGISMLIFASIVSSVPSMLGQSFEMVKNDPQSLIVLLIFAVLGIAVTAGIVFIE
RAQRRIPVNYAQKQQLGRKIYADQQSHLPLKINMAGVIPAIFASALLMFPASLGQWVGNSADPSTWQQILQTMSLVLAPG
QPLYLVLFGAMIIFFCYFYTALVFSPREVAENLKRSGAYIPGIRPGLQTQRYLDHVLNRLTFIGAIYMTAICLMPMLLQS
SFGIPFHLGGTSLLIMVVVVMDFISQLQAHLMTHQYHDQTLIR
>Mature_442_residues
AKQSAPTSAIPMNPLVFIRKYDELWNRLLFLIGALVVYRLGSHIPVPGINPVSLADLFSRNENTILSMFNMFSGGALERM
SIMALGIMPYISASIIVQMMSAVLPSLEALKKEGEAGRRKLNKYTRQGTLFLASIQAIFMCTGLISQNLTLSSGLTFYIP
AVSSLVAGAMFLMWLGEQITERGVGNGISMLIFASIVSSVPSMLGQSFEMVKNDPQSLIVLLIFAVLGIAVTAGIVFIER
AQRRIPVNYAQKQQLGRKIYADQQSHLPLKINMAGVIPAIFASALLMFPASLGQWVGNSADPSTWQQILQTMSLVLAPGQ
PLYLVLFGAMIIFFCYFYTALVFSPREVAENLKRSGAYIPGIRPGLQTQRYLDHVLNRLTFIGAIYMTAICLMPMLLQSS
FGIPFHLGGTSLLIMVVVVMDFISQLQAHLMTHQYHDQTLIR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=419, Percent_Identity=57.2792362768496, Blast_Score=449, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48829; Mature: 48698

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00755 SECY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQSAPTSAIPMNPLVFIRKYDELWNRLLFLIGALVVYRLGSHIPVPGINPVSLADLFS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC
RNENTILSMFNMFSGGALERMSIMALGIMPYISASIIVQMMSAVLPSLEALKKEGEAGRR
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KLNKYTRQGTLFLASIQAIFMCTGLISQNLTLSSGLTFYIPAVSSLVAGAMFLMWLGEQI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
TERGVGNGISMLIFASIVSSVPSMLGQSFEMVKNDPQSLIVLLIFAVLGIAVTAGIVFIE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RAQRRIPVNYAQKQQLGRKIYADQQSHLPLKINMAGVIPAIFASALLMFPASLGQWVGNS
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADPSTWQQILQTMSLVLAPGQPLYLVLFGAMIIFFCYFYTALVFSPREVAENLKRSGAYI
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
PGIRPGLQTQRYLDHVLNRLTFIGAIYMTAICLMPMLLQSSFGIPFHLGGTSLLIMVVVV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH
MDFISQLQAHLMTHQYHDQTLIR
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKQSAPTSAIPMNPLVFIRKYDELWNRLLFLIGALVVYRLGSHIPVPGINPVSLADLFS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC
RNENTILSMFNMFSGGALERMSIMALGIMPYISASIIVQMMSAVLPSLEALKKEGEAGRR
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KLNKYTRQGTLFLASIQAIFMCTGLISQNLTLSSGLTFYIPAVSSLVAGAMFLMWLGEQI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
TERGVGNGISMLIFASIVSSVPSMLGQSFEMVKNDPQSLIVLLIFAVLGIAVTAGIVFIE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RAQRRIPVNYAQKQQLGRKIYADQQSHLPLKINMAGVIPAIFASALLMFPASLGQWVGNS
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADPSTWQQILQTMSLVLAPGQPLYLVLFGAMIIFFCYFYTALVFSPREVAENLKRSGAYI
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
PGIRPGLQTQRYLDHVLNRLTFIGAIYMTAICLMPMLLQSSFGIPFHLGGTSLLIMVVVV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH
MDFISQLQAHLMTHQYHDQTLIR
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]