| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652174
Identifier: 148652174
GI number: 148652174
Start: 434455
End: 435042
Strand: Direct
Name: 148652174
Synonym: PsycPRwf_0362
Alternate gene names: NA
Gene position: 434455-435042 (Clockwise)
Preceding gene: 148652173
Following gene: 148652175
Centisome position: 14.58
GC content: 50.17
Gene sequence:
>588_bases ATGCTAACCATTAACAATCAAAACAACGCTCAATCAAAAGTGGCACCCAAGCTTTATTCAGCCAAAAGTGGTTGGCTTCT TATTAGCGCCCTAACTTTAGGCGTGGCTGTGGGCTGTAGCGGCGGTAATGATACCGAGGCACAGAACCAAGCTGAGCCTA GTGCGAGTGAAAGCATTCCTGCTGATCCTGCAGCCACCCAAAGCGAGGCACCTGAAGCAGAAGCTTCTGAGACGATAGAG TCTTCAGAGTCTACTGAGCAAGCACCTGCTGCTGACAGTGAGGGCTCAGAAGCTAAACCTGCTGAGGAGACAACAGCAGC TGCACCAGCACAGTCTGCGCCTTTAGCTGCAGATGCCGGCCAAAAATTGTATGAAGTAAAATGTAAGCAATGCCATGAGC CGGGGTTATTAAATGCACCTAAGTTTGGTAATAACGCGGACTGGGCGCCGCGTATTGCGCAAGGTAAAGAGGTGCTATAT AAGCATTCTGCTGAAGGATTTAAAGCCATGCCAGCCCAAGCAGACGGTACGGCAAGTGTCGAAGAGGTGCATGCTGCCGT AGATTATATGGTTGAGCACGCCAGCTAA
Upstream 100 bases:
>100_bases GACAGGATGTGGTATTAAAGATTAAATAGGGCGCCATCACGGACGCTACTATAGATGTAACATGGACTTTTAACCAGATT TAGCAAAGGCGAGGTTTCTC
Downstream 100 bases:
>100_bases ATGGCCGTTTGAGGGTAGGGGCGTTATTGCGCACCGCCTAAGAAGCCATGACCTGCTGATCGGCAACGTTCGGCGGTAAA AATCGCCTTGATAATCTGAT
Product: cytochrome c5-like protein
Products: NA
Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Cytochrome C-Type Protein; Cytochrome C Subfamily; Cytochrome C5-Like Protein; Cb-Type Cytochrome Oxidase Subunit III; Cytochrome C Class IE; Cytochrome C Oxidase Subunit III; CytoChrome C Class I; Cytochrome C Oxidase Cbb3-Type Subunit III; Lipoprotein
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MLTINNQNNAQSKVAPKLYSAKSGWLLISALTLGVAVGCSGGNDTEAQNQAEPSASESIPADPAATQSEAPEAEASETIE SSESTEQAPAADSEGSEAKPAEETTAAAPAQSAPLAADAGQKLYEVKCKQCHEPGLLNAPKFGNNADWAPRIAQGKEVLY KHSAEGFKAMPAQADGTASVEEVHAAVDYMVEHAS
Sequences:
>Translated_195_residues MLTINNQNNAQSKVAPKLYSAKSGWLLISALTLGVAVGCSGGNDTEAQNQAEPSASESIPADPAATQSEAPEAEASETIE SSESTEQAPAADSEGSEAKPAEETTAAAPAQSAPLAADAGQKLYEVKCKQCHEPGLLNAPKFGNNADWAPRIAQGKEVLY KHSAEGFKAMPAQADGTASVEEVHAAVDYMVEHAS >Mature_195_residues MLTINNQNNAQSKVAPKLYSAKSGWLLISALTLGVAVGCSGGNDTEAQNQAEPSASESIPADPAATQSEAPEAEASETIE SSESTEQAPAADSEGSEAKPAEETTAAAPAQSAPLAADAGQKLYEVKCKQCHEPGLLNAPKFGNNADWAPRIAQGKEVLY KHSAEGFKAMPAQADGTASVEEVHAAVDYMVEHAS
Specific function: Unknown
COG id: COG3245
COG function: function code C; Cytochrome c5
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20095; Mature: 20095
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTINNQNNAQSKVAPKLYSAKSGWLLISALTLGVAVGCSGGNDTEAQNQAEPSASESIP CEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ADPAATQSEAPEAEASETIESSESTEQAPAADSEGSEAKPAEETTAAAPAQSAPLAADAG CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHH QKLYEVKCKQCHEPGLLNAPKFGNNADWAPRIAQGKEVLYKHSAEGFKAMPAQADGTASV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHH EEVHAAVDYMVEHAS HHHHHHHHHHHHCCC >Mature Secondary Structure MLTINNQNNAQSKVAPKLYSAKSGWLLISALTLGVAVGCSGGNDTEAQNQAEPSASESIP CEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ADPAATQSEAPEAEASETIESSESTEQAPAADSEGSEAKPAEETTAAAPAQSAPLAADAG CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHH QKLYEVKCKQCHEPGLLNAPKFGNNADWAPRIAQGKEVLYKHSAEGFKAMPAQADGTASV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHH EEVHAAVDYMVEHAS HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA