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The map label for this gene is xerC [H]

Identifier: 148652162

GI number: 148652162

Start: 422454

End: 423479

Strand: Direct

Name: xerC [H]

Synonym: PsycPRwf_0350

Alternate gene names: 148652162

Gene position: 422454-423479 (Clockwise)

Preceding gene: 148652161

Following gene: 148652164

Centisome position: 14.18

GC content: 52.05

Gene sequence:

>1026_bases
ATGACAAATAAAGTGCTGGAGAAGCAGCAGCTAGAGAATAAGAAGCAGCTAGAGGATTCTTTGGCCACCAAACCTGTTTT
TGCTGAGCTAGAGGCCTTATTGCCACCAGTGGAGCAGTGGTTAAGCGAGCTGTCGGTGCGTCAGATGTCAGCGCATACCA
TTGATGCCTATTATGCAGGCCTGTATCAATTGGCCTGCTTTTTGGCGCAGGCTCAGCTCAACTGGACCCGCTGTGATAAA
CGGCAATTGGCCAAATATATCGCTAAGCGCTTAGATACTGATGCGCTGGCCATCTCTAGCGTGCAGCAAGAGCTGTCGGC
CATTCGCCACTTTTATAGCTGGCTTATTGAGCAAGGCCAAGCCCGCATCAATCCCACTACCGGCTACCAGCTCAAGCGTG
CGCCTCGGCCGCTGCCCAGTATTGCTGATGGCGACTTAATTGCTCAGCTACTTGAGCAGCCCATGCCAGATACACCAGAG
CAGGCTCGGCTGTGGATACGGGATAAAGCGATGTTTGAGCTGCTCTACAGTAGTGGCCTACGTGTGGGGGAGCTGGTCGG
GCTGAATGTGGCTGATCTGCGTATCGATGCCAAAGGGGAGCGTGGTGAGGTGCGGGTGACAGGTAAAGGTAATAAAACCC
GCTTAGTGCCAGTGGGGCGCCAAGCATTAAAGGCCATTAATAGGTATCTGCCACATCGCAATCTGTGGGAAGAGCGTGGT
GATAGGGCTTTATTTATCAGTGAAAAACATGGTACTCGATTGACCACACGAGCGGTGCAGCAGCGCCTAAAAGTTGCCGC
TGCCCGAGCTGGTATTGCCCAAAATATGTATCCGCATTTGCTGCGCCACTGTTTTGCCTCGCACATGTTGTCAGGCAGTG
GCGATTTGCGGGCAGTGCAAGAGATGCTTGGCCACAGTGATATCAGCACCACGCAGATTTATACCCATGTAGACTTTGAT
AGACTGACTCAAGTGTATGATAAAGCGCATCCTCGAGCCTCGCAGGAGAAAAAAACGCCTCGTTAA

Upstream 100 bases:

>100_bases
CTTTCGTCTATGAAGGTGTGTTTAGTCCTGATGGTATTATGGCGCAGGCCGGTCTTAAGCCATTAAGCTAGGTGTAAGCA
AGGTTAGGTCAACCACAGTC

Downstream 100 bases:

>100_bases
CGCTTAACCAACGTGGCTAACATACCGCCAGTACTTACCCATAACCCAGTACTTACCCATAATAAAGCCAGATAGCCACC
TGCCATCTGGCTTTGTTATT

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTNKVLEKQQLENKKQLEDSLATKPVFAELEALLPPVEQWLSELSVRQMSAHTIDAYYAGLYQLACFLAQAQLNWTRCDK
RQLAKYIAKRLDTDALAISSVQQELSAIRHFYSWLIEQGQARINPTTGYQLKRAPRPLPSIADGDLIAQLLEQPMPDTPE
QARLWIRDKAMFELLYSSGLRVGELVGLNVADLRIDAKGERGEVRVTGKGNKTRLVPVGRQALKAINRYLPHRNLWEERG
DRALFISEKHGTRLTTRAVQQRLKVAAARAGIAQNMYPHLLRHCFASHMLSGSGDLRAVQEMLGHSDISTTQIYTHVDFD
RLTQVYDKAHPRASQEKKTPR

Sequences:

>Translated_341_residues
MTNKVLEKQQLENKKQLEDSLATKPVFAELEALLPPVEQWLSELSVRQMSAHTIDAYYAGLYQLACFLAQAQLNWTRCDK
RQLAKYIAKRLDTDALAISSVQQELSAIRHFYSWLIEQGQARINPTTGYQLKRAPRPLPSIADGDLIAQLLEQPMPDTPE
QARLWIRDKAMFELLYSSGLRVGELVGLNVADLRIDAKGERGEVRVTGKGNKTRLVPVGRQALKAINRYLPHRNLWEERG
DRALFISEKHGTRLTTRAVQQRLKVAAARAGIAQNMYPHLLRHCFASHMLSGSGDLRAVQEMLGHSDISTTQIYTHVDFD
RLTQVYDKAHPRASQEKKTPR
>Mature_340_residues
TNKVLEKQQLENKKQLEDSLATKPVFAELEALLPPVEQWLSELSVRQMSAHTIDAYYAGLYQLACFLAQAQLNWTRCDKR
QLAKYIAKRLDTDALAISSVQQELSAIRHFYSWLIEQGQARINPTTGYQLKRAPRPLPSIADGDLIAQLLEQPMPDTPEQ
ARLWIRDKAMFELLYSSGLRVGELVGLNVADLRIDAKGERGEVRVTGKGNKTRLVPVGRQALKAINRYLPHRNLWEERGD
RALFISEKHGTRLTTRAVQQRLKVAAARAGIAQNMYPHLLRHCFASHMLSGSGDLRAVQEMLGHSDISTTQIYTHVDFDR
LTQVYDKAHPRASQEKKTPR

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG4973

COG function: function code L; Site-specific recombinase XerC

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=303, Percent_Identity=42.9042904290429, Blast_Score=224, Evalue=4e-60,
Organism=Escherichia coli, GI1789261, Length=304, Percent_Identity=38.1578947368421, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1790768, Length=164, Percent_Identity=29.8780487804878, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 38715; Mature: 38584

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKVLEKQQLENKKQLEDSLATKPVFAELEALLPPVEQWLSELSVRQMSAHTIDAYYAG
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
LYQLACFLAQAQLNWTRCDKRQLAKYIAKRLDTDALAISSVQQELSAIRHFYSWLIEQGQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ARINPTTGYQLKRAPRPLPSIADGDLIAQLLEQPMPDTPEQARLWIRDKAMFELLYSSGL
CCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
RVGELVGLNVADLRIDAKGERGEVRVTGKGNKTRLVPVGRQALKAINRYLPHRNLWEERG
CCHHHHCCCHHHEEEECCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHCCCCHHHHHCC
DRALFISEKHGTRLTTRAVQQRLKVAAARAGIAQNMYPHLLRHCFASHMLSGSGDLRAVQ
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
EMLGHSDISTTQIYTHVDFDRLTQVYDKAHPRASQEKKTPR
HHHCCCCCCHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TNKVLEKQQLENKKQLEDSLATKPVFAELEALLPPVEQWLSELSVRQMSAHTIDAYYAG
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
LYQLACFLAQAQLNWTRCDKRQLAKYIAKRLDTDALAISSVQQELSAIRHFYSWLIEQGQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ARINPTTGYQLKRAPRPLPSIADGDLIAQLLEQPMPDTPEQARLWIRDKAMFELLYSSGL
CCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
RVGELVGLNVADLRIDAKGERGEVRVTGKGNKTRLVPVGRQALKAINRYLPHRNLWEERG
CCHHHHCCCHHHEEEECCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHCCCCHHHHHCC
DRALFISEKHGTRLTTRAVQQRLKVAAARAGIAQNMYPHLLRHCFASHMLSGSGDLRAVQ
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
EMLGHSDISTTQIYTHVDFDRLTQVYDKAHPRASQEKKTPR
HHHCCCCCCHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]