Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148643837

Identifier: 148643837

GI number: 148643837

Start: 1836199

End: 1836468

Strand: Reverse

Name: 148643837

Synonym: Msm_1777

Alternate gene names: NA

Gene position: 1836468-1836199 (Counterclockwise)

Preceding gene: 148643843

Following gene: 148643831

Centisome position: 99.1

GC content: 23.7

Gene sequence:

>270_bases
ATGAACAAAAAAGAACTTTATTCAGCTATTGGATTTATAAAAATATCAAAAACACGTCAAAAAATATTAAAATGTCTTGA
AAATAAGTATATGTTGCCTTCTGAAATTGCACTAAAAACAGATTTAGGAACTACACAAGTATCTAATGCACTTTCAGACT
TAAAAAACAAAAGATTAGTTGAATGTATTAATGAAGAAGACAAAAAAGGAAGAATATATGAAATAACTAAACTTGGATTG
GAAGTTTTAAACCAAATAAAAAAATTATAA

Upstream 100 bases:

>100_bases
CATAATAGTTAAATATTTATTTTAAGCTAATAATAAGCTTATTATATATTTCCAATAATATATATAAAGTTATAACCTCA
TTATTAATTAAATAATACAT

Downstream 100 bases:

>100_bases
TCTATGTTTTAAATCATTAATTTTAGTTAAAACTTCTTCATCATGAGTTAAGTTATATAAAACACCATAAAAATACAAGG
ACTGATTTAAAAGATTTTTC

Product: putative transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MNKKELYSAIGFIKISKTRQKILKCLENKYMLPSEIALKTDLGTTQVSNALSDLKNKRLVECINEEDKKGRIYEITKLGL
EVLNQIKKL

Sequences:

>Translated_89_residues
MNKKELYSAIGFIKISKTRQKILKCLENKYMLPSEIALKTDLGTTQVSNALSDLKNKRLVECINEEDKKGRIYEITKLGL
EVLNQIKKL
>Mature_89_residues
MNKKELYSAIGFIKISKTRQKILKCLENKYMLPSEIALKTDLGTTQVSNALSDLKNKRLVECINEEDKKGRIYEITKLGL
EVLNQIKKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10228; Mature: 10228

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKELYSAIGFIKISKTRQKILKCLENKYMLPSEIALKTDLGTTQVSNALSDLKNKRLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH
ECINEEDKKGRIYEITKLGLEVLNQIKKL
HHHCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKKELYSAIGFIKISKTRQKILKCLENKYMLPSEIALKTDLGTTQVSNALSDLKNKRLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH
ECINEEDKKGRIYEITKLGLEVLNQIKKL
HHHCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA