Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148643825

Identifier: 148643825

GI number: 148643825

Start: 1827534

End: 1828403

Strand: Reverse

Name: 148643825

Synonym: Msm_1765

Alternate gene names: NA

Gene position: 1828403-1827534 (Counterclockwise)

Preceding gene: 148643831

Following gene: 148643824

Centisome position: 98.66

GC content: 29.2

Gene sequence:

>870_bases
ATGAAAAAAAATAAGATATATCACGGATACCATCATGAGGATTTAACACTGAAATTTCTAAAAGAAAACACCACAAAGTA
TATTGCAAAAATTACAGGTGCAGAGTTTTGTGATGAAATAAATGTTGAGCTAATAAACCTGAAACCAAAAGTTCTCAGAA
TAGATTACGGCATAAAGAAAAAGGATAAAATAATTCTTTATGAATTTTTATCTACTAAATCCAATATTGCAAACATTTTA
AGAAGAATCTTTCTATATGTAGCCAGAATCGGATATGATTATCAGTTAAAGGTAAAAATAAATCTTGTAGTGACTCCTGA
AATCGATAAAAATCAGGTAGTTCTTGAATACTCCCCTGGGCAGTTTTTTAGACCTGAAGCAATATCATTTAAAGACTATG
ACGGAGACAAATTATTAAGTAATATAACTTATAAAGTTAAAAATAACATAAAACTAACCTGCAATGAGTTTCTTGCATTA
GGGATATTGCCGTTAATGAAAACCAAACACGAAGCCGGAGTGCAAGTAGTAAAAACTCTGGAACTTGCTAGAAAAATAAC
TGATATTGATGATGAATTAAAAGATTCTGTACTTGGCATACTGATAGTACTTGCAGATAAATTCATTGAAAATCAGGATT
TGAAAAATAAAGTAATAGATGTGATAAAAATGGAAATAACAATACTTCACGACTATGTAACATCACATGAAAAAGAATGG
TTAGAACAAGGAAAAATAGAAGGGAAACTAGAGGGAAAAGAAGAAGAAAAACTAAAAATAGCAAAAAACATGCACAAAGA
AAACTATCCAGTTAAAGAAATTGCCAAAATAACAAAACTTGACTGCAAAACAATAGAAAAACTAAAATAG

Upstream 100 bases:

>100_bases
ATGAAGTATTTATTTCATTTAAAACTATTTATTTATGCTTTAATTATTGTTTTAATAAAAAACTGATGGTTATATAAATA
TTAAAGACCAATGGATTAGT

Downstream 100 bases:

>100_bases
AGGAAAACAAAACCTCTATTTTAATAAATTTACAATATAATGTATCAATACACTTTTTAACACCAGATTTTGAAAAATCA
AGTAAAATGTGTGATAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKKNKIYHGYHHEDLTLKFLKENTTKYIAKITGAEFCDEINVELINLKPKVLRIDYGIKKKDKIILYEFLSTKSNIANIL
RRIFLYVARIGYDYQLKVKINLVVTPEIDKNQVVLEYSPGQFFRPEAISFKDYDGDKLLSNITYKVKNNIKLTCNEFLAL
GILPLMKTKHEAGVQVVKTLELARKITDIDDELKDSVLGILIVLADKFIENQDLKNKVIDVIKMEITILHDYVTSHEKEW
LEQGKIEGKLEGKEEEKLKIAKNMHKENYPVKEIAKITKLDCKTIEKLK

Sequences:

>Translated_289_residues
MKKNKIYHGYHHEDLTLKFLKENTTKYIAKITGAEFCDEINVELINLKPKVLRIDYGIKKKDKIILYEFLSTKSNIANIL
RRIFLYVARIGYDYQLKVKINLVVTPEIDKNQVVLEYSPGQFFRPEAISFKDYDGDKLLSNITYKVKNNIKLTCNEFLAL
GILPLMKTKHEAGVQVVKTLELARKITDIDDELKDSVLGILIVLADKFIENQDLKNKVIDVIKMEITILHDYVTSHEKEW
LEQGKIEGKLEGKEEEKLKIAKNMHKENYPVKEIAKITKLDCKTIEKLK
>Mature_289_residues
MKKNKIYHGYHHEDLTLKFLKENTTKYIAKITGAEFCDEINVELINLKPKVLRIDYGIKKKDKIILYEFLSTKSNIANIL
RRIFLYVARIGYDYQLKVKINLVVTPEIDKNQVVLEYSPGQFFRPEAISFKDYDGDKLLSNITYKVKNNIKLTCNEFLAL
GILPLMKTKHEAGVQVVKTLELARKITDIDDELKDSVLGILIVLADKFIENQDLKNKVIDVIKMEITILHDYVTSHEKEW
LEQGKIEGKLEGKEEEKLKIAKNMHKENYPVKEIAKITKLDCKTIEKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33601; Mature: 33601

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNKIYHGYHHEDLTLKFLKENTTKYIAKITGAEFCDEINVELINLKPKVLRIDYGIKK
CCCCCEECCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCC
KDKIILYEFLSTKSNIANILRRIFLYVARIGYDYQLKVKINLVVTPEIDKNQVVLEYSPG
CCCEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEECCC
QFFRPEAISFKDYDGDKLLSNITYKVKNNIKLTCNEFLALGILPLMKTKHEAGVQVVKTL
CCCCCCCCCCCCCCCHHHHHHCEEEECCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHH
ELARKITDIDDELKDSVLGILIVLADKFIENQDLKNKVIDVIKMEITILHDYVTSHEKEW
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQGKIEGKLEGKEEEKLKIAKNMHKENYPVKEIAKITKLDCKTIEKLK
HHCCCCCCEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKNKIYHGYHHEDLTLKFLKENTTKYIAKITGAEFCDEINVELINLKPKVLRIDYGIKK
CCCCCEECCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCC
KDKIILYEFLSTKSNIANILRRIFLYVARIGYDYQLKVKINLVVTPEIDKNQVVLEYSPG
CCCEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEECCC
QFFRPEAISFKDYDGDKLLSNITYKVKNNIKLTCNEFLALGILPLMKTKHEAGVQVVKTL
CCCCCCCCCCCCCCCHHHHHHCEEEECCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHH
ELARKITDIDDELKDSVLGILIVLADKFIENQDLKNKVIDVIKMEITILHDYVTSHEKEW
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQGKIEGKLEGKEEEKLKIAKNMHKENYPVKEIAKITKLDCKTIEKLK
HHCCCCCCEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA