| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
Click here to switch to the map view.
The map label for this gene is paaK [H]
Identifier: 148643774
GI number: 148643774
Start: 1759588
End: 1760889
Strand: Reverse
Name: paaK [H]
Synonym: Msm_1714
Alternate gene names: 148643774
Gene position: 1760889-1759588 (Counterclockwise)
Preceding gene: 148643775
Following gene: 148643773
Centisome position: 95.02
GC content: 34.95
Gene sequence:
>1302_bases ATGTTTTGGAATGAGAAAATCGAATGTATGTCAAGGGAAGAACTTGAAGAACTACAATTAAAAAAGCTTCAAAAAACAGT GAAACTAGCTTTTAACAAAATTCCATATTACAATAAAAAATATACTGATTGTGGAGTTTTCCCAGAAGATATTGAAACTT TAAAAGATATTGAAAAACTGCCGTTCATCACAAAAGATGATTTAAGAGAAAGCTATCCTTATGGTCTTTTTGCAGTTGAC ATGAAAGACATAAAAGAAATACATTCATCTTCAGGAACTACCGGAAAACCTGTAGTATCCGGATACACCAGAAAAGATTT AGATACCTGGGCAGAAACAACTGCAAGAGGATTGGGAATGATGGGTGTTGGTGAAAACGATATTATTCAAAATACCCACG GATACGGATTATTCACAGGAGGATTTGGTGTCCATTACGGATCACATAAAGTTGGAGCAACAATAGTTCCCATATCAACA GGACAGACCAGAAGACAAATTGAAATAATGAAAGACTTTGGAGTAACCTGTTTAATTGCAACACCGTCATATGGAATTCA CTTGGCTGAAGTAGCTGAAGATGATGGAATCAATCCCAAAGATATGAATCTTAAAGCTATCGGATTTGGAGCTGAAATGT GGAGTGAAGAAATCAGACAAAAATTAGAAAATCTCTTTGGAGCACCTGCATACAACATTTACGGACTGACAGAGCTTATG GGACCTGGTGTAGGAGTGGAATGCAGTGCTCAAAAAGGATTGCATATAGCTGAAGACATTTACTATCCTGAAATAATTGA TTCCACAACCGGCAAAACATTAGGAGAAAACCAAAAAGGTGAACTTGTATTAACAAACCTTGAAAGAGAAGGAATGCCTA TAATCAGATTTAGAACAAAAGACCTGACTTCACTTACCTATGAGCCATGTGAATGTGGAAGAACAAGTGCAAGAATGAGC AGAATAACCGGTAGAGCAGACGATATGATTAAAGTAAAAGGAGTAGCTATATTTCCATCCCAAATAGAAAAAGCATTACT TAAAGTAGGTGATGTAGAGCCTCATTATTTAATTATAGTTACAAGACCTGGAACTTTAGACCAAATAGAAGTAAAAGTGG AAGCTTCCAAAAACCTTTTCTTTGATGGAGTAAAGGAAATGGTCGATATTCAAAGCAAAATAGCTAAATCTATTGAAAAT GAAACTGGAATAAGAGTAAAAGTAACATTAGTTGAACCAAAAAGCCTTCCAAGATATGAAGGAAAAGCTAAAAGAGTTAT AGATAAAAGAAATTTACACTAA
Upstream 100 bases:
>100_bases TTAACTTTAATAAAATACTGTTTTTTATTGTAAAAACATATAAACATTTAAAGCTAATAAGAAACATATATTATTATTAA AAATAAAATGAGGCCAATTT
Downstream 100 bases:
>100_bases GGGGATTAAAATGAACAATATGAAAGTAAAACAATTATCAATATTCTTACAAAACAAAAAAGGAAGCTTATATGATGTTC TTGAAACATTATCTGAACAT
Product: coenzyme F390 synthetase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MFWNEKIECMSREELEELQLKKLQKTVKLAFNKIPYYNKKYTDCGVFPEDIETLKDIEKLPFITKDDLRESYPYGLFAVD MKDIKEIHSSSGTTGKPVVSGYTRKDLDTWAETTARGLGMMGVGENDIIQNTHGYGLFTGGFGVHYGSHKVGATIVPIST GQTRRQIEIMKDFGVTCLIATPSYGIHLAEVAEDDGINPKDMNLKAIGFGAEMWSEEIRQKLENLFGAPAYNIYGLTELM GPGVGVECSAQKGLHIAEDIYYPEIIDSTTGKTLGENQKGELVLTNLEREGMPIIRFRTKDLTSLTYEPCECGRTSARMS RITGRADDMIKVKGVAIFPSQIEKALLKVGDVEPHYLIIVTRPGTLDQIEVKVEASKNLFFDGVKEMVDIQSKIAKSIEN ETGIRVKVTLVEPKSLPRYEGKAKRVIDKRNLH
Sequences:
>Translated_433_residues MFWNEKIECMSREELEELQLKKLQKTVKLAFNKIPYYNKKYTDCGVFPEDIETLKDIEKLPFITKDDLRESYPYGLFAVD MKDIKEIHSSSGTTGKPVVSGYTRKDLDTWAETTARGLGMMGVGENDIIQNTHGYGLFTGGFGVHYGSHKVGATIVPIST GQTRRQIEIMKDFGVTCLIATPSYGIHLAEVAEDDGINPKDMNLKAIGFGAEMWSEEIRQKLENLFGAPAYNIYGLTELM GPGVGVECSAQKGLHIAEDIYYPEIIDSTTGKTLGENQKGELVLTNLEREGMPIIRFRTKDLTSLTYEPCECGRTSARMS RITGRADDMIKVKGVAIFPSQIEKALLKVGDVEPHYLIIVTRPGTLDQIEVKVEASKNLFFDGVKEMVDIQSKIAKSIEN ETGIRVKVTLVEPKSLPRYEGKAKRVIDKRNLH >Mature_433_residues MFWNEKIECMSREELEELQLKKLQKTVKLAFNKIPYYNKKYTDCGVFPEDIETLKDIEKLPFITKDDLRESYPYGLFAVD MKDIKEIHSSSGTTGKPVVSGYTRKDLDTWAETTARGLGMMGVGENDIIQNTHGYGLFTGGFGVHYGSHKVGATIVPIST GQTRRQIEIMKDFGVTCLIATPSYGIHLAEVAEDDGINPKDMNLKAIGFGAEMWSEEIRQKLENLFGAPAYNIYGLTELM GPGVGVECSAQKGLHIAEDIYYPEIIDSTTGKTLGENQKGELVLTNLEREGMPIIRFRTKDLTSLTYEPCECGRTSARMS RITGRADDMIKVKGVAIFPSQIEKALLKVGDVEPHYLIIVTRPGTLDQIEVKVEASKNLFFDGVKEMVDIQSKIAKSIEN ETGIRVKVTLVEPKSLPRYEGKAKRVIDKRNLH
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=430, Percent_Identity=42.5581395348837, Blast_Score=365, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 48422; Mature: 48422
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFWNEKIECMSREELEELQLKKLQKTVKLAFNKIPYYNKKYTDCGVFPEDIETLKDIEKL CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHC PFITKDDLRESYPYGLFAVDMKDIKEIHSSSGTTGKPVVSGYTRKDLDTWAETTARGLGM CCCCHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE MGVGENDIIQNTHGYGLFTGGFGVHYGSHKVGATIVPISTGQTRRQIEIMKDFGVTCLIA ECCCCCCHHCCCCCCEEEECCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEE TPSYGIHLAEVAEDDGINPKDMNLKAIGFGAEMWSEEIRQKLENLFGAPAYNIYGLTELM CCCCCEEEEEHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHEEHHHHH GPGVGVECSAQKGLHIAEDIYYPEIIDSTTGKTLGENQKGELVLTNLEREGMPIIRFRTK CCCCCEEECCCCCCCHHHHCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECC DLTSLTYEPCECGRTSARMSRITGRADDMIKVKGVAIFPSQIEKALLKVGDVEPHYLIIV CCCCCCCCCHHCCCHHHHHHHHCCCCCCEEEEEEEEECHHHHHHHHHHHCCCCCCEEEEE TRPGTLDQIEVKVEASKNLFFDGVKEMVDIQSKIAKSIENETGIRVKVTLVEPKSLPRYE ECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC GKAKRVIDKRNLH CHHHHHHHHCCCC >Mature Secondary Structure MFWNEKIECMSREELEELQLKKLQKTVKLAFNKIPYYNKKYTDCGVFPEDIETLKDIEKL CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHC PFITKDDLRESYPYGLFAVDMKDIKEIHSSSGTTGKPVVSGYTRKDLDTWAETTARGLGM CCCCHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE MGVGENDIIQNTHGYGLFTGGFGVHYGSHKVGATIVPISTGQTRRQIEIMKDFGVTCLIA ECCCCCCHHCCCCCCEEEECCCEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEE TPSYGIHLAEVAEDDGINPKDMNLKAIGFGAEMWSEEIRQKLENLFGAPAYNIYGLTELM CCCCCEEEEEHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHEEHHHHH GPGVGVECSAQKGLHIAEDIYYPEIIDSTTGKTLGENQKGELVLTNLEREGMPIIRFRTK CCCCCEEECCCCCCCHHHHCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECC DLTSLTYEPCECGRTSARMSRITGRADDMIKVKGVAIFPSQIEKALLKVGDVEPHYLIIV CCCCCCCCCHHCCCHHHHHHHHCCCCCCEEEEEEEEECHHHHHHHHHHHCCCCCCEEEEE TRPGTLDQIEVKVEASKNLFFDGVKEMVDIQSKIAKSIENETGIRVKVTLVEPKSLPRYE ECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC GKAKRVIDKRNLH CHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]