| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643771
Identifier: 148643771
GI number: 148643771
Start: 1757202
End: 1758482
Strand: Reverse
Name: 148643771
Synonym: Msm_1711
Alternate gene names: NA
Gene position: 1758482-1757202 (Counterclockwise)
Preceding gene: 148643773
Following gene: 148643757
Centisome position: 94.89
GC content: 29.43
Gene sequence:
>1281_bases ATGGTTAAATGTGATAACTGCGGAGCATCAATTGAAGAAAGCGACAATTTTTGTATGAATTGTGGAAATAAAATTGAAAA AAACAATGAACATGACATACTTCCATTAGTAACCCTAATTAAATGTCCAAATTGTAAAAAACAGATACTGAATGAATGGA AATACTGTCGTTTTTGCGGATATGACACAAGCCAACCAAGCGGAACATCACTAATTAAAAAAATAGTTGATGATGTTGCT TATAATTCAAATGTTTTAAGATTTTGCACTACCTGCGGTAAAAAATATCATGACGACTCAAGTATCTGTCAAAATTGCGG AAGTGAAATTCCAAAACCAAAAGAAAATTATTTCGGAGACCTGTCTTATGAAAACTTCCAGCTACTCTATATAAACCAGA TTCTTATTCCATTATCCGAACATTACAATACAAACTTTAGAAAAATTCTTATAAAAGACCATTTTAACATTTCATATGAC GAAGAATCACATATACTGTATTTACTAATTGAATATGCAATACGTAATCCTAATGAAAATATTATCCCTTATTTTGAAAA AATATTAAATGAAACAAAAGAAAATTTTAAAGATATTGAAAAGGCTGTTTTAAATAAAGTAAAACCACAAATAGAGGAAT TATTCAATAGTGAAGGGTTGACATTCAAAAACAAAAAACAAATTAGTGCTGCCGAATACCAAACTATTAAAACACCAATT ACAACAGATAAACACGGAGGAGGTACAAAAGCACTGGCAACATTTGGTTTCGGACTATTGGGATATGCAGCTTCTTCAGG TGTGAAAACTGAGGTAAAAACTGAGAAAATTAAAACACAGGATGCTAAATACTGTTATACAACCATCAATATTTCAAAAA AATATGTGGATATTGATATTGCAGTATCCAGAGAAAATAACACTAAAGTTATTCTAAAATGGAGAAATATATCCCTATTT AGCGATGATGACTACTTTGTATTAGATTCCGGAGAAACCTTTAAATGTGTACTTTACAGTGATGAAATTAATGAAGTAAT CACCTCATCACTTCTTGACGTTGCAGTTACCCACGATTCCAGATTAATCCATGAATACCGTCCGGAAATATTATTAAAAG TACAAAAATTTTTAAATGAGCTAATAAACCAGGAAATTAACAGTTCTAAAATAAATGAATCTTCAAAATCAACTGTTAAT CTTGAAAAACTAATTGAAATGTATGACAAAGGATTATTAACCGATGAAGAATTTATTGCTATGAAGAAAAAAATTAATTA A
Upstream 100 bases:
>100_bases AATTGGATATATCTATTATATAAAGTTTGAGATTATACGAATAAAAATAAACAAACTATATTAAATTAAAAAATTAAAAA AATATATAAAGTGTGGTAAT
Downstream 100 bases:
>100_bases AAAAAGAGGGTTTATTTAACTGCATTAATTACAGTTTTTCCACCCATATAAGGAACTAAAACATCAGGAACTTTAACACT GCCATCTTCCTGCTGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MVKCDNCGASIEESDNFCMNCGNKIEKNNEHDILPLVTLIKCPNCKKQILNEWKYCRFCGYDTSQPSGTSLIKKIVDDVA YNSNVLRFCTTCGKKYHDDSSICQNCGSEIPKPKENYFGDLSYENFQLLYINQILIPLSEHYNTNFRKILIKDHFNISYD EESHILYLLIEYAIRNPNENIIPYFEKILNETKENFKDIEKAVLNKVKPQIEELFNSEGLTFKNKKQISAAEYQTIKTPI TTDKHGGGTKALATFGFGLLGYAASSGVKTEVKTEKIKTQDAKYCYTTINISKKYVDIDIAVSRENNTKVILKWRNISLF SDDDYFVLDSGETFKCVLYSDEINEVITSSLLDVAVTHDSRLIHEYRPEILLKVQKFLNELINQEINSSKINESSKSTVN LEKLIEMYDKGLLTDEEFIAMKKKIN
Sequences:
>Translated_426_residues MVKCDNCGASIEESDNFCMNCGNKIEKNNEHDILPLVTLIKCPNCKKQILNEWKYCRFCGYDTSQPSGTSLIKKIVDDVA YNSNVLRFCTTCGKKYHDDSSICQNCGSEIPKPKENYFGDLSYENFQLLYINQILIPLSEHYNTNFRKILIKDHFNISYD EESHILYLLIEYAIRNPNENIIPYFEKILNETKENFKDIEKAVLNKVKPQIEELFNSEGLTFKNKKQISAAEYQTIKTPI TTDKHGGGTKALATFGFGLLGYAASSGVKTEVKTEKIKTQDAKYCYTTINISKKYVDIDIAVSRENNTKVILKWRNISLF SDDDYFVLDSGETFKCVLYSDEINEVITSSLLDVAVTHDSRLIHEYRPEILLKVQKFLNELINQEINSSKINESSKSTVN LEKLIEMYDKGLLTDEEFIAMKKKIN >Mature_426_residues MVKCDNCGASIEESDNFCMNCGNKIEKNNEHDILPLVTLIKCPNCKKQILNEWKYCRFCGYDTSQPSGTSLIKKIVDDVA YNSNVLRFCTTCGKKYHDDSSICQNCGSEIPKPKENYFGDLSYENFQLLYINQILIPLSEHYNTNFRKILIKDHFNISYD EESHILYLLIEYAIRNPNENIIPYFEKILNETKENFKDIEKAVLNKVKPQIEELFNSEGLTFKNKKQISAAEYQTIKTPI TTDKHGGGTKALATFGFGLLGYAASSGVKTEVKTEKIKTQDAKYCYTTINISKKYVDIDIAVSRENNTKVILKWRNISLF SDDDYFVLDSGETFKCVLYSDEINEVITSSLLDVAVTHDSRLIHEYRPEILLKVQKFLNELINQEINSSKINESSKSTVN LEKLIEMYDKGLLTDEEFIAMKKKIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48917; Mature: 48917
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKCDNCGASIEESDNFCMNCGNKIEKNNEHDILPLVTLIKCPNCKKQILNEWKYCRFCG CCEECCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCEEECC YDTSQPSGTSLIKKIVDDVAYNSNVLRFCTTCGKKYHDDSSICQNCGSEIPKPKENYFGD CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHCCCC LSYENFQLLYINQILIPLSEHYNTNFRKILIKDHFNISYDEESHILYLLIEYAIRNPNEN CCCCCEEEEEEEHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEHHHCCCCCC IIPYFEKILNETKENFKDIEKAVLNKVKPQIEELFNSEGLTFKNKKQISAAEYQTIKTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHCCCCC TTDKHGGGTKALATFGFGLLGYAASSGVKTEVKTEKIKTQDAKYCYTTINISKKYVDIDI CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEEECEEEEEEEE AVSRENNTKVILKWRNISLFSDDDYFVLDSGETFKCVLYSDEINEVITSSLLDVAVTHDS EEECCCCCEEEEEEECEEEECCCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHCCCCH RLIHEYRPEILLKVQKFLNELINQEINSSKINESSKSTVNLEKLIEMYDKGLLTDEEFIA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEECHHHHHHHHHCCCCCCHHHHH MKKKIN HHHCCC >Mature Secondary Structure MVKCDNCGASIEESDNFCMNCGNKIEKNNEHDILPLVTLIKCPNCKKQILNEWKYCRFCG CCEECCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCEEECC YDTSQPSGTSLIKKIVDDVAYNSNVLRFCTTCGKKYHDDSSICQNCGSEIPKPKENYFGD CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHCCCC LSYENFQLLYINQILIPLSEHYNTNFRKILIKDHFNISYDEESHILYLLIEYAIRNPNEN CCCCCEEEEEEEHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEHHHCCCCCC IIPYFEKILNETKENFKDIEKAVLNKVKPQIEELFNSEGLTFKNKKQISAAEYQTIKTPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHCCCCC TTDKHGGGTKALATFGFGLLGYAASSGVKTEVKTEKIKTQDAKYCYTTINISKKYVDIDI CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEEECEEEEEEEE AVSRENNTKVILKWRNISLFSDDDYFVLDSGETFKCVLYSDEINEVITSSLLDVAVTHDS EEECCCCCEEEEEEECEEEECCCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHCCCCH RLIHEYRPEILLKVQKFLNELINQEINSSKINESSKSTVNLEKLIEMYDKGLLTDEEFIA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEECHHHHHHHHHCCCCCCHHHHH MKKKIN HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA