| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643704
Identifier: 148643704
GI number: 148643704
Start: 1695671
End: 1696003
Strand: Reverse
Name: 148643704
Synonym: Msm_1644
Alternate gene names: NA
Gene position: 1696003-1695671 (Counterclockwise)
Preceding gene: 148643707
Following gene: 148643698
Centisome position: 91.52
GC content: 30.03
Gene sequence:
>333_bases ATGACTGACTACACCAGCATAAGAATAAAAAAAGAAATAGCTGAAAAAATACAATTAATAAAAATACAAAACAACTGCAA ATCACTAAACGAAACACTAGAACAACTAATACCCCGAACAGTAAACGAAAACTACGAGTTCATAAAAGAACAACCAATAT TCACAATAAACAACAAACCCATAACATTCACAGACCTGAAAAACAACAATACAGGCAAAACATGGGGAAATGAAAAACAA AACGCAACAATAGTATTTAAAGATAAACAAGGAGCATTTATAAGATTCAATGATGAAGATGAAGTATTCTTAGAATACTA CCACTTCATCTAA
Upstream 100 bases:
>100_bases TATGGTTGGTTATTTTAATAAGTTTCATCTACGAAACATTAATCTAACCCCCCCATATTTTTTTTATATTATAAGCCAAA AAAAAGGAAGATGATAAAAA
Downstream 100 bases:
>100_bases AACCATTCTTTTTTTAATATTAAAAATAAATCCATAAAACCTCAAATTTTTAAAGTTTTAAAAATTTGTTCCATAAGGTA CATAGCATCATCCAATTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTDYTSIRIKKEIAEKIQLIKIQNNCKSLNETLEQLIPRTVNENYEFIKEQPIFTINNKPITFTDLKNNNTGKTWGNEKQ NATIVFKDKQGAFIRFNDEDEVFLEYYHFI
Sequences:
>Translated_110_residues MTDYTSIRIKKEIAEKIQLIKIQNNCKSLNETLEQLIPRTVNENYEFIKEQPIFTINNKPITFTDLKNNNTGKTWGNEKQ NATIVFKDKQGAFIRFNDEDEVFLEYYHFI >Mature_109_residues TDYTSIRIKKEIAEKIQLIKIQNNCKSLNETLEQLIPRTVNENYEFIKEQPIFTINNKPITFTDLKNNNTGKTWGNEKQN ATIVFKDKQGAFIRFNDEDEVFLEYYHFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13082; Mature: 12951
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDYTSIRIKKEIAEKIQLIKIQNNCKSLNETLEQLIPRTVNENYEFIKEQPIFTINNKP CCCCCCEEEHHHHHHHHEEEEECCHHHHHHHHHHHHCCHHCCCCCHHHHCCCEEEECCCC ITFTDLKNNNTGKTWGNEKQNATIVFKDKQGAFIRFNDEDEVFLEYYHFI EEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEHEEECCC >Mature Secondary Structure TDYTSIRIKKEIAEKIQLIKIQNNCKSLNETLEQLIPRTVNENYEFIKEQPIFTINNKP CCCCCEEEHHHHHHHHEEEEECCHHHHHHHHHHHHCCHHCCCCCHHHHCCCEEEECCCC ITFTDLKNNNTGKTWGNEKQNATIVFKDKQGAFIRFNDEDEVFLEYYHFI EEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA