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The map label for this gene is 148643555

Identifier: 148643555

GI number: 148643555

Start: 1521670

End: 1522155

Strand: Reverse

Name: 148643555

Synonym: Msm_1495

Alternate gene names: NA

Gene position: 1522155-1521670 (Counterclockwise)

Preceding gene: 148643556

Following gene: 148643548

Centisome position: 82.14

GC content: 34.77

Gene sequence:

>486_bases
ATGAAATCTAGAAACATCTCATTAATATTGCTAATATTATTTGTTGGAGTACTTGCAGTTTCAACTGCTGTGAATTTCAT
GGATAATGAAGTGGCAGCTGCACCTTCACAAGGAACACTTAATATTGAGGATTCTAAAACTCATGAAGTACGAAGCGTAC
ACTATGAAGCTAGCGGGAAATGTTACAAAGTCGTAGACGGAGATACAATCTGGGTAGAAGGTATTGGAAAAATCAGATTT
GTACAGGTAAACACTCCTGAAAGAGGAGAACCAGGATACCACGAAGCAAAAGACTATGTTAAAGAAAAATGCCTTGGAAA
AACAGTTTACTTAGACATTGATGATAAAAAACACTACGACAAATACAACAGAACATTAGCTATTGTTTATACTGAAAATT
TGGATATAAACAGAGAATTATTAAATGAAAACCTTGCAGAAATTATGTACATACCTCCAAGCGAGTTCGCTAAAGGCACT
GTATAA

Upstream 100 bases:

>100_bases
CAAAAAATCCCAACAAATGCAAAAGCTGCAGATTCCAAAGCTACTGTATACACGATTAAAACACAACATTTATTTAAGTT
AAAATACCATATAAAAAACA

Downstream 100 bases:

>100_bases
TTTCTCACTTTTTATTTTTTTAAACTGCCCTGTAAAGGCCCAAATACAATTTATTTTTCTTGTAAACTTCATCTAAAATA
TCATTCCACTCGGAAATTTC

Product: nuclease

Products: NA

Alternate protein names: Staphylococcal Nuclease Domain-Containing Protein; Thermonuclease

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKSRNISLILLILFVGVLAVSTAVNFMDNEVAAAPSQGTLNIEDSKTHEVRSVHYEASGKCYKVVDGDTIWVEGIGKIRF
VQVNTPERGEPGYHEAKDYVKEKCLGKTVYLDIDDKKHYDKYNRTLAIVYTENLDINRELLNENLAEIMYIPPSEFAKGT
V

Sequences:

>Translated_161_residues
MKSRNISLILLILFVGVLAVSTAVNFMDNEVAAAPSQGTLNIEDSKTHEVRSVHYEASGKCYKVVDGDTIWVEGIGKIRF
VQVNTPERGEPGYHEAKDYVKEKCLGKTVYLDIDDKKHYDKYNRTLAIVYTENLDINRELLNENLAEIMYIPPSEFAKGT
V
>Mature_161_residues
MKSRNISLILLILFVGVLAVSTAVNFMDNEVAAAPSQGTLNIEDSKTHEVRSVHYEASGKCYKVVDGDTIWVEGIGKIRF
VQVNTPERGEPGYHEAKDYVKEKCLGKTVYLDIDDKKHYDKYNRTLAIVYTENLDINRELLNENLAEIMYIPPSEFAKGT
V

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18158; Mature: 18158

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRNISLILLILFVGVLAVSTAVNFMDNEVAAAPSQGTLNIEDSKTHEVRSVHYEASGK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCC
CYKVVDGDTIWVEGIGKIRFVQVNTPERGEPGYHEAKDYVKEKCLGKTVYLDIDDKKHYD
EEEEECCCEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHH
KYNRTLAIVYTENLDINRELLNENLAEIMYIPPSEFAKGTV
HHCCEEEEEEECCCCCCHHHHCCCHHHEEECCCHHHCCCCC
>Mature Secondary Structure
MKSRNISLILLILFVGVLAVSTAVNFMDNEVAAAPSQGTLNIEDSKTHEVRSVHYEASGK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCC
CYKVVDGDTIWVEGIGKIRFVQVNTPERGEPGYHEAKDYVKEKCLGKTVYLDIDDKKHYD
EEEEECCCEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHH
KYNRTLAIVYTENLDINRELLNENLAEIMYIPPSEFAKGTV
HHCCEEEEEEECCCCCCHHHHCCCHHHEEECCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA