Click here to switch to the map view.

The map label for this gene is yebQ [H]

Identifier: 148643525

GI number: 148643525

Start: 1489768

End: 1491159

Strand: Reverse

Name: yebQ [H]

Synonym: Msm_1465

Alternate gene names: 148643525

Gene position: 1491159-1489768 (Counterclockwise)

Preceding gene: 148643526

Following gene: 148643524

Centisome position: 80.47

GC content: 34.7

Gene sequence:

>1392_bases
ATGATTAAAAAAACAACAGCATTTTATGTAGTGCTTGTAGGATCACTGGCTAGTTTTATGGCTGCCTACACATCAAATGC
AGTAACAATGGCTCTGCCGGAACTTGCAAGAGTATTTCACCTAAGCAATATTTTGCAAAACTGGACAATAAACCTCTATT
TATTAACAATGGCTGTATTAAGTGTCCCCTTCGGAAAAATTTGTGCCCAAAAAGGACTTAAAAAATCATTCTTCTATGGT
GCACTTGTATTTTTCATAGGAACTGCTGGAATAATAATGGCAGCAAATACTGAAATGCTATTACTGTTCAGATTTATTCA
GGCAATAGGATCTGCTGCAATATTTGTATCTTCAGTAAGTATGATTGTAAAAGCTGTTCCAAATAATCAAAGAGGACGTG
CATTGGGAATAAACATAGCTTCAGTTTATATCGGACTGTCTCTGGCTCCAGTACTGGGAGGAAGTTTAACATATAACTTT
GGCTGGGAAAGTATCTTTGCAATAACACTTCCTGTAAGTTTTATTGTAGTGGTCCTTACTTATTTAAAAATTAAAGAGGA
ATGGAAATTAGATGCAAATGATCCGATTGATATAAAAGGAAGTGTTTTTTATGGAATTGGAATTTCAGCATTTATGTATG
GATTTACAGAACTGCATACACTAACCGGACAGGCAATTACAGCAGTTGGAGTAATATTTCTAATAATATTCATTTACTAT
GAATTAAAACAGAAATATCCTATATTTAATGTAAGATTATATAAGAACCACAAATTCTTATCAAGCAACATAGCCAGCGT
AATAAGTTATATTTCCATTTTTAGTGTATCTACAATTATCAATTACCATTTCCAATATATTTTAGGCTGGAATGCACAAA
TGACCGGACTGATTTTAATCAGCATGCCTATAATGCAGGCAATTGTAACTCCGCAGTCCGGAAAATTGTCTGATTTGATA
AATCCTCAAAAGCTCTCAGCACTTGGAATGGGACTTGCAACAATAGCCATATTAATACTGACAACAATGGATGACTCCAC
ATCAGTATATATCATAATTATTGCATTGATGATTGGAGGTGTCGGATATGGACTGTTCAGCAGCCCAAATACAAATACAA
TTATGAGCAGTGTTCCGCCAAATGAAACAACCATGGCATCAGCTGCAGTAGCTACCATGAGAGTTATCGGTCAGACATTA
AGTATAGGCATTTTAACAGTTATTTTTGCATTTGTAATGGGTAATGTGGCCATAACCCCTAGCGTATATCCTCAACTTAG
TGAAAGCTGTCATTTAGCTTTAATATGTTCAACAGTACTTGGAGTCATAAGTGTTTTAGTATCACTTGTAGGAATGAACT
CTGATGATAAATTAAACACCACACAAAGATAA

Upstream 100 bases:

>100_bases
AATTTTTTTATAGTTGCTGGCAAAGTTTTATTGTACATACTTAACAAATATATTAATATTCTTATTTTAAAAAAACAATA
AAACGGAGAAATAAAAACAA

Downstream 100 bases:

>100_bases
CCACCACATTATCTTTTAAAAATCAGTACATAAAGGCTATAAGAATTAGTTAAAAAACTAATTCTTATTTTTTTGTAAAA
ATTGTAATGTTCATCTATTT

Product: multidrug efflux permease, AraJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MIKKTTAFYVVLVGSLASFMAAYTSNAVTMALPELARVFHLSNILQNWTINLYLLTMAVLSVPFGKICAQKGLKKSFFYG
ALVFFIGTAGIIMAANTEMLLLFRFIQAIGSAAIFVSSVSMIVKAVPNNQRGRALGINIASVYIGLSLAPVLGGSLTYNF
GWESIFAITLPVSFIVVVLTYLKIKEEWKLDANDPIDIKGSVFYGIGISAFMYGFTELHTLTGQAITAVGVIFLIIFIYY
ELKQKYPIFNVRLYKNHKFLSSNIASVISYISIFSVSTIINYHFQYILGWNAQMTGLILISMPIMQAIVTPQSGKLSDLI
NPQKLSALGMGLATIAILILTTMDDSTSVYIIIIALMIGGVGYGLFSSPNTNTIMSSVPPNETTMASAAVATMRVIGQTL
SIGILTVIFAFVMGNVAITPSVYPQLSESCHLALICSTVLGVISVLVSLVGMNSDDKLNTTQR

Sequences:

>Translated_463_residues
MIKKTTAFYVVLVGSLASFMAAYTSNAVTMALPELARVFHLSNILQNWTINLYLLTMAVLSVPFGKICAQKGLKKSFFYG
ALVFFIGTAGIIMAANTEMLLLFRFIQAIGSAAIFVSSVSMIVKAVPNNQRGRALGINIASVYIGLSLAPVLGGSLTYNF
GWESIFAITLPVSFIVVVLTYLKIKEEWKLDANDPIDIKGSVFYGIGISAFMYGFTELHTLTGQAITAVGVIFLIIFIYY
ELKQKYPIFNVRLYKNHKFLSSNIASVISYISIFSVSTIINYHFQYILGWNAQMTGLILISMPIMQAIVTPQSGKLSDLI
NPQKLSALGMGLATIAILILTTMDDSTSVYIIIIALMIGGVGYGLFSSPNTNTIMSSVPPNETTMASAAVATMRVIGQTL
SIGILTVIFAFVMGNVAITPSVYPQLSESCHLALICSTVLGVISVLVSLVGMNSDDKLNTTQR
>Mature_463_residues
MIKKTTAFYVVLVGSLASFMAAYTSNAVTMALPELARVFHLSNILQNWTINLYLLTMAVLSVPFGKICAQKGLKKSFFYG
ALVFFIGTAGIIMAANTEMLLLFRFIQAIGSAAIFVSSVSMIVKAVPNNQRGRALGINIASVYIGLSLAPVLGGSLTYNF
GWESIFAITLPVSFIVVVLTYLKIKEEWKLDANDPIDIKGSVFYGIGISAFMYGFTELHTLTGQAITAVGVIFLIIFIYY
ELKQKYPIFNVRLYKNHKFLSSNIASVISYISIFSVSTIINYHFQYILGWNAQMTGLILISMPIMQAIVTPQSGKLSDLI
NPQKLSALGMGLATIAILILTTMDDSTSVYIIIIALMIGGVGYGLFSSPNTNTIMSSVPPNETTMASAAVATMRVIGQTL
SIGILTVIFAFVMGNVAITPSVYPQLSESCHLALICSTVLGVISVLVSLVGMNSDDKLNTTQR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=385, Percent_Identity=25.974025974026, Blast_Score=125, Evalue=6e-30,
Organism=Escherichia coli, GI1789042, Length=424, Percent_Identity=24.2924528301887, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1788710, Length=394, Percent_Identity=22.3350253807107, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1790195, Length=302, Percent_Identity=23.5099337748344, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI48994889, Length=147, Percent_Identity=25.1700680272109, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50132; Mature: 50132

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKTTAFYVVLVGSLASFMAAYTSNAVTMALPELARVFHLSNILQNWTINLYLLTMAVL
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVPFGKICAQKGLKKSFFYGALVFFIGTAGIIMAANTEMLLLFRFIQAIGSAAIFVSSVS
HCCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHH
MIVKAVPNNQRGRALGINIASVYIGLSLAPVLGGSLTYNFGWESIFAITLPVSFIVVVLT
HHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH
YLKIKEEWKLDANDPIDIKGSVFYGIGISAFMYGFTELHTLTGQAITAVGVIFLIIFIYY
HHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ELKQKYPIFNVRLYKNHKFLSSNIASVISYISIFSVSTIINYHFQYILGWNAQMTGLILI
HHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHEEH
SMPIMQAIVTPQSGKLSDLINPQKLSALGMGLATIAILILTTMDDSTSVYIIIIALMIGG
HHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCC
VGYGLFSSPNTNTIMSSVPPNETTMASAAVATMRVIGQTLSIGILTVIFAFVMGNVAITP
CCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC
SVYPQLSESCHLALICSTVLGVISVLVSLVGMNSDDKLNTTQR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIKKTTAFYVVLVGSLASFMAAYTSNAVTMALPELARVFHLSNILQNWTINLYLLTMAVL
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVPFGKICAQKGLKKSFFYGALVFFIGTAGIIMAANTEMLLLFRFIQAIGSAAIFVSSVS
HCCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHH
MIVKAVPNNQRGRALGINIASVYIGLSLAPVLGGSLTYNFGWESIFAITLPVSFIVVVLT
HHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH
YLKIKEEWKLDANDPIDIKGSVFYGIGISAFMYGFTELHTLTGQAITAVGVIFLIIFIYY
HHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ELKQKYPIFNVRLYKNHKFLSSNIASVISYISIFSVSTIINYHFQYILGWNAQMTGLILI
HHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHEEH
SMPIMQAIVTPQSGKLSDLINPQKLSALGMGLATIAILILTTMDDSTSVYIIIIALMIGG
HHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCC
VGYGLFSSPNTNTIMSSVPPNETTMASAAVATMRVIGQTLSIGILTVIFAFVMGNVAITP
CCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC
SVYPQLSESCHLALICSTVLGVISVLVSLVGMNSDDKLNTTQR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]