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The map label for this gene is 148643505

Identifier: 148643505

GI number: 148643505

Start: 1469026

End: 1469811

Strand: Reverse

Name: 148643505

Synonym: Msm_1445

Alternate gene names: NA

Gene position: 1469811-1469026 (Counterclockwise)

Preceding gene: 148643508

Following gene: 148643494

Centisome position: 79.31

GC content: 29.13

Gene sequence:

>786_bases
ATGAAACAGGAAGACATCAACTTATTAAAACAATTGGGGCTAACCACATACGAAGCTAAAGCATATATTACATTAAGTTC
ACTAATTCAGGCCACAGCTGATGAAATAAGTGACAAATCAGATATACCAAGATCCAAAATATATGATGTCTTAAAAAGAT
TAAATTCAAAAGACTACATCAAAATAGAAAGTGGACGGCCCTTAACATATCATGTAAATCCTCCGATTAATGTATTGAAA
AGGGAAAAAGAAAAATTTATCAGAAGAATTAATAAAACCGGCGAAAATCTGAATACATTATATGAAAAGAAAATATCTGA
AGTTGAAGCTCCAATTTGGAGAATAAGTGGCCTGGACAATATAATCGATAAAGAACTGGAAATCATCAGACAGTCTAAAA
AAACAATAAATATGAGAATAGGATTTTTACTTCAGGACGAAGGATCCAAATTAGTTTATGAACTTCTTTTAAAATCTGAA
AATGTTAAAATAAACCTTATGGTTTCACCTTACTGCCGGATATCCTACAAAGAATTTAATATTTCCAAATTAGTTAATCA
GAAAAATGTAAATGTCTATACAACGGATATTCCTTATGTTAAACTGTTAATATCTGATTCAAAAGAAATGATGCATATAT
ATTCAAAATTTTCAAAGGAAAATGGTGAAATACTTCCAAATACTGCTATCGGAATCTGGAACCAGTACGAAGAAATAGCA
AACAACTATAATGAAAGATTTGAAAATCAGCTAAAAAAAATAGCTAATAATAATGTGAAACAGTAA

Upstream 100 bases:

>100_bases
ATTTATTATAATAACAGTTGATTTAATCCATTATAAAGATTTTGTAACTTGTTAAGGGTGAAAAGTAAGTTATATTAATG
GATAAAACAAAATAATTACT

Downstream 100 bases:

>100_bases
GTAAAAATAAACCTGCTAAAAACACTATTATTAAAGTTAAAAATAAATCATCCCTATTTTCAAATTTCTCATGTTTTATA
TTTACTATTAAAGGAATTAA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; TrmB Family Transcriptional Regulator; Transcription Regulator Helix-Turn-Helix Family; Sugar-Specific Transcriptional Regulator TrmB Family

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKQEDINLLKQLGLTTYEAKAYITLSSLIQATADEISDKSDIPRSKIYDVLKRLNSKDYIKIESGRPLTYHVNPPINVLK
REKEKFIRRINKTGENLNTLYEKKISEVEAPIWRISGLDNIIDKELEIIRQSKKTINMRIGFLLQDEGSKLVYELLLKSE
NVKINLMVSPYCRISYKEFNISKLVNQKNVNVYTTDIPYVKLLISDSKEMMHIYSKFSKENGEILPNTAIGIWNQYEEIA
NNYNERFENQLKKIANNNVKQ

Sequences:

>Translated_261_residues
MKQEDINLLKQLGLTTYEAKAYITLSSLIQATADEISDKSDIPRSKIYDVLKRLNSKDYIKIESGRPLTYHVNPPINVLK
REKEKFIRRINKTGENLNTLYEKKISEVEAPIWRISGLDNIIDKELEIIRQSKKTINMRIGFLLQDEGSKLVYELLLKSE
NVKINLMVSPYCRISYKEFNISKLVNQKNVNVYTTDIPYVKLLISDSKEMMHIYSKFSKENGEILPNTAIGIWNQYEEIA
NNYNERFENQLKKIANNNVKQ
>Mature_261_residues
MKQEDINLLKQLGLTTYEAKAYITLSSLIQATADEISDKSDIPRSKIYDVLKRLNSKDYIKIESGRPLTYHVNPPINVLK
REKEKFIRRINKTGENLNTLYEKKISEVEAPIWRISGLDNIIDKELEIIRQSKKTINMRIGFLLQDEGSKLVYELLLKSE
NVKINLMVSPYCRISYKEFNISKLVNQKNVNVYTTDIPYVKLLISDSKEMMHIYSKFSKENGEILPNTAIGIWNQYEEIA
NNYNERFENQLKKIANNNVKQ

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30458; Mature: 30458

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEDINLLKQLGLTTYEAKAYITLSSLIQATADEISDKSDIPRSKIYDVLKRLNSKDYI
CCCHHHHHHHHCCCCEEHHHHEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEE
KIESGRPLTYHVNPPINVLKREKEKFIRRINKTGENLNTLYEKKISEVEAPIWRISGLDN
EEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCHHH
IIDKELEIIRQSKKTINMRIGFLLQDEGSKLVYELLLKSENVKINLMVSPYCRISYKEFN
HHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCEEEEECCCC
ISKLVNQKNVNVYTTDIPYVKLLISDSKEMMHIYSKFSKENGEILPNTAIGIWNQYEEIA
HHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
NNYNERFENQLKKIANNNVKQ
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKQEDINLLKQLGLTTYEAKAYITLSSLIQATADEISDKSDIPRSKIYDVLKRLNSKDYI
CCCHHHHHHHHCCCCEEHHHHEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEE
KIESGRPLTYHVNPPINVLKREKEKFIRRINKTGENLNTLYEKKISEVEAPIWRISGLDN
EEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCHHH
IIDKELEIIRQSKKTINMRIGFLLQDEGSKLVYELLLKSENVKINLMVSPYCRISYKEFN
HHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCEEEEECCCC
ISKLVNQKNVNVYTTDIPYVKLLISDSKEMMHIYSKFSKENGEILPNTAIGIWNQYEEIA
HHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
NNYNERFENQLKKIANNNVKQ
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA